Physcomitrium patens (spreading earthmoss): 112290883
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Entry
112290883 CDS
T01041
Name
(RefSeq) protein VACUOLELESS1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112290883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112290883
Membrane trafficking [BR:
ppp04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
112290883
Hops complex
112290883
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
112290883
NCBI-ProteinID:
XP_024393485
LinkDB
All DBs
Position
13:14029531..14036405
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AA seq
837 aa
AA seq
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MAISIAAEWEALYNRYYRKLEVYTMCWNGIDLSRHKVACARFGGPIAMVRDESKMVQLRA
ESARAKLLLFSASGKLLSSVPWDRPGGRLITLGWTDEEILLAVVHDGTVFQYNIHGELIP
EQLSLGQECWDQGVADCIIWGSGLVVITEQNQLFSIPNLETKKVVKLADPHLEDPPHCMA
VVEPQYTFSGKLEVLLAVGPSVLVVDEDNFQDQMVDFGPIQKMTLSSNGNFLACFTHDGR
LLVVLTDFSKTLLEHTTESALPPEQLVWCGVDSVLLYWEEQLVMVGPYGDVVRFSYDEPI
VLTPECDGVRILSNTYMEFLQRVPDSTVSIFKIGSTSPAAMLYDALEQFDKRSAKADENI
RLISDKLPEAVGDCIDAAGHEFDISLQRTLLRAAAYGRAFCRKFDRDQFQDMCRTLRVLN
AVRQFEIGIPLSIQQFKDLTAPVLVARLVNAHRHLLALRISEYLDLSKEVVLVHWACTKI
IASSDVPDAILLDVLLEKLKVCPGISYATVAADAHRNGRQKLAALLLDYEPRASEQVPLL
TSMGEEERALVKAIESGDTDLVYFSILHIWRQKPLPDFFRIIQAKSLARHLFVAYARQND
PEILKKFFISIGQLQSAAEVFLKESWSYSRNMGTRSGSALQGPRLKAIDQASELYAQTKE
HMFEAKAAEEQGKLLKLQQELEISTGQPIFVDSSVSDTIRTLITLGNHRAAQRVKVDFKV
PDKRYYWLKVFALATAKQWDALEKFSKERKPPIGYKPFVEACIEEEENQEALKYIVKLTN
PEERAEAYARIGMVKEATEAAAQAKDNELLGRLRSTFGQNTPAGALFDSLRDRLSLT
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctcaatcgcggccgaatgggaggccctgtacaatcgttactaccggaagctg
gaggtttacactatgtgttggaacggtattgatttgagccggcacaaagtggcatgtgcg
aggtttggaggaccgattgccatggtgcgggatgagtccaagatggtgcagctgcgagct
gaatctgctcgagcgaagttgctcttgttctcggcctccggcaagctgctctcttccgtg
ccgtgggatcgtccgggcgggcgtcttattaccctcgggtggactgatgaggagattctt
ctggccgttgtgcatgatggtactgtcttccagtataatattcatggcgagcttattcca
gagcagctttcgcttggacaagagtgctgggatcagggagtggcggattgtataatttgg
gggagcggccttgtggtaatcacagagcagaatcagctctttagtatcccgaatttggag
acaaagaaagttgtcaagctagccgatcctcatttggaagaccctccgcattgtatggct
gttgtggagccgcagtacacattctctggaaagttggaagtcctcctagccgttggacct
tctgttctggtagtagatgaggataattttcaagaccagatggttgattttggaccaata
caaaagatgactctttcgtcaaatgggaattttttggcctgtttcacacatgatggtcgt
ctactggttgtgctcacggattttagcaaaacattgctggagcacacaacagagtcagct
ctaccaccagagcagctcgtgtggtgcggggttgacagtgttctcctctattgggaagag
caactagtcatggtaggtccttacggtgatgtagtcagattctcgtacgatgaacctatc
gttctcacacctgaatgtgacggcgtccgcatactgtccaacacgtacatggagttcctg
cagcgggtacccgactccaccgtttctatcttcaaaattggcagcacttctcctgcagcc
atgctctacgatgctctggagcaattcgacaaacgaagtgcgaaggcggatgagaacatc
agattaataagtgataaacttccagaggctgttggagattgtatcgatgcagcaggccat
gaatttgacatctcgcttcaacgcactctgctgcgggctgctgcttatggcagggcgttt
tgcaggaagtttgatcgagatcagtttcaggatatgtgtaggaccctgagagtgctgaat
gctgtacgtcagtttgagattggtatacctttaagtatccagcagttcaaggaccttaca
gcgccggttcttgtagcacggcttgtgaatgcccatcgacatctactggctcttcgcata
tctgagtatctagatctaagcaaggaagttgtcctggtacattgggcatgtacaaagatt
attgcatctagtgatgttccggacgcaatccttctggacgtattattggagaagctcaaa
gtgtgcccgggaatttcgtatgccactgtggctgctgatgcacatcgaaatgggcggcaa
aaactcgctgctcttcttctggactacgaaccacgtgcctctgagcaggttcctctcttg
acaagtatgggtgaagaggagagggcgcttgtgaaggccatcgaaagtggtgacactgac
ttggtttatttctcaattcttcacatttggcgccaaaaacctctgccagatttctttcgc
atcatccaagcgaaatctcttgctcgacatctgttcgttgcatatgccaggcaaaatgat
ccggagattttgaagaaattcttcatctcaattggacaactccagagcgcagcagaagtc
tttttgaaagaatcgtggtcttattcccggaacatgggaactcgttctgggtcagctttg
caagggcctcgcttgaaagcaatagatcaagcaagtgaactttatgcacagaccaaagaa
catatgtttgaagctaaggccgctgaagaacagggaaaactgctcaagttgcagcaagag
cttgaaatttccacaggacaacccatctttgtggactccagtgtcagtgacacaatacgc
acgctgatcactctaggcaatcaccgagctgctcaaagagtgaaagtggacttcaaggta
cctgacaagcgctactactggctgaaagtgtttgcacttgcaactgcaaagcagtgggac
gcactggagaagttttcaaaagaaaggaaacctcccattggatacaaaccgtttgtggag
gcatgcatagaagaggaggaaaaccaagaggctctgaagtatattgtaaagcttacaaat
cctgaagagagagcagaggcatatgcacgtattggcatggtaaaagaagcaactgaagct
gctgctcaagcgaaagacaatgaattactgggcagattgagatctacatttggtcaaaat
acgcctgcgggggctctttttgattctttacgtgatcgcctctcattaacttag
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