Physcomitrium patens (spreading earthmoss): 112291222
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Entry
112291222 CDS
T01041
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppp03021
]
112291222
Transcription machinery [BR:
ppp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
112291222
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
112291222
NCBI-ProteinID:
XP_024394131
UniProt:
A0A2K1L787
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Position
1:complement(5557136..5561778)
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AA seq
609 aa
AA seq
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MASSMYPGNPPPGRPPVPPPPGAWGNHYGPPMHYGPPGHYPVPMGFNPNGQLPMPLPLPP
HHGGYPGGPLLPGHLPPGGAYPGVPHYGAQPPPPPGAGVQKISAGPGGPQQGVVQGQGGF
GNRVPQQGGTSQVDSVPGRREETKEERNERKKREYYEKKRQEEKRQRGKGQPMRPGAGSS
KPANNGSRDAYADKKVASSVGDKIENRLKRPSTFLCKIKFRNDLPDSTAQPKLMHINTDK
DRYTRYQFTSLEKNWKHKLHVEPDLGIPLDLLDISNYKKIDASVPLDPEDAALLLDDEVK
VKKDSSGIRKKDRPTDKGVAWLVKTQYVSPINLDPAKQAMTEKQAKDLREQREGRRIDVE
AGNDRQQQIEAIEESFRAAKQLPKHLTKPELEPVEILPLLPDFERMGDQYVHMVFDTDPL
TDAPGLTDLDQDARLEIESRAIVKSFTIATSDESKPEKFIGYMVPKPDELDRNFYDDEEE
IQYTWVREYHWDIRPDDSKNFVFCFSEDAVHYLPLGTKLVLQKKKAKDGKSKYDTEDRDF
PVPASVTVIRRDPTQDEEDIREDAREKFMEGGDTYRRKRSRSPEDDIPVSTKRRGRQDDY
SDEEDEMSV
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcgatgtatccgggcaatccgccaccggggaggccaccagtgccacccccg
cctggcgcttgggggaatcactacgggcctccgatgcattatggcccgcctgggcattac
cccgtgccgatggggtttaaccctaacgggcaattgccgatgcctctacctctcccgcct
catcacggagggtatcccggaggacccctcctgccggggcatttgccgcctggtggtgcc
taccctggcgtccctcactatggagctcagcctccaccgcctcccggtgctggagtgcag
aagatttcggctggacccggagggccgcagcagggagtggttcaaggacagggggggttt
gggaacagggtgccgcagcaagggggaacctcgcaggtggattctgtgccggggcgtagg
gaggagacgaaggaggagaggaatgagaggaaaaagagagagtattatgagaagaagagg
caggaggagaagcggcagcgagggaaagggcagccgatgaggcctggggctgggagttcg
aagcctgctaataacggttcgagggatgcgtatgcagacaagaaggtagcctcgagtgtt
ggggataaaattgagaataggctcaagcgcccgtcaacattcttgtgtaaaataaagttt
agaaacgatttgcctgatagcacggctcaacccaagctgatgcacataaatactgataaa
gacaggtacaccaggtatcaatttacttcattggagaagaactggaagcacaaattacat
gtggagcctgatcttggtatcccattggatctactggatatcagcaactataagaagatc
gatgcttcagtgcctttagatccagaagatgccgcactcctgttggatgatgaagtaaag
gtgaagaaagattcctcaggcatacggaagaaagataggccaactgacaagggtgtggca
tggctcgtgaagacacaatacgtctctcccatcaatctcgatcctgccaagcaggctatg
accgaaaagcaagccaaggatttgagagagcaacgtgagggtcggcgtatcgatgttgag
gcaggaaatgataggcaacagcaaattgaagcaattgaagagtccttcagagctgcaaaa
caacttcctaaacatcttaccaaacctgaactcgagcctgtcgaaattctgccgttgctt
cctgatttcgagaggatgggcgaccagtatgtgcatatggtttttgatactgatcctctg
acggatgcccccggattaacggacttggaccaagacgcacgcctggaaatcgaatcacgg
gcaatcgtgaagagcttcacaattgctacttcagacgaatcgaagcccgaaaaatttatt
gggtatatggttccgaaaccagatgagttggataggaatttttacgacgacgaagaagaa
attcaatacacatgggtgcgagagtatcattgggatatccgacccgatgattcgaagaac
ttcgttttttgtttcagtgaagacgctgttcattatttgcccttaggcacaaagttggtg
cttcaaaagaaaaaggcaaaagatggaaagtcaaaatatgacactgaagatagagatttc
ccagtacctgcgagtgtgactgttattaggagagaccccactcaggacgaagaggatata
agagaagatgctagagaaaaattcatggagggaggagatacgtacagacgaaagagatca
cggtcgccagaggatgacattccagtgagcacgaagcgaagagggcgtcaagatgattat
agtgatgaagaagatgaaatgtcggtgtaa
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