Physcomitrium patens (spreading earthmoss): 112291276
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Entry
112291276 CDS
T01041
Name
(RefSeq) cleavage stimulating factor 64 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112291276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112291276
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
112291276
U7-dependent histone pre-mRNA processing factors
112291276
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
partial_CstF
RRM_7
RRM_10
Spo7_2_N
Motif
Other DBs
NCBI-GeneID:
112291276
NCBI-ProteinID:
XP_024394214
UniProt:
A0A7I4AVW9
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Position
14:8536848..8542467
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AA seq
571 aa
AA seq
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MSSTQHRASRCVFVGNIPYDATEEQLVHICEEVGPVVNFRLVLDRETGKPKGYGFCEFRD
EETALSARRNLQGYEINGRQLRVDFAENEKGGGGDRNREQRQGGQVQQQAGYSTDTQRQA
GGRQAGSNVEIDRSGEPPMGQASAVAAAQFLTGTLGGNQQQQQQYGVSMNGQSMPVANGT
PVSVGNDPLTSHLAGMSKQQLYEVMVQMKTMIQQNQQQARQILMANPQLTKAIFQAQIML
GMVRAPPMAMLPTQQQQQQQQQQQQQQQQRAAVPAAPTNLMPQPPLPPQPRPVQTPVISG
QVQQPNPLQPISYHPQQMQQPLPQATFQPQGGMVQQSMGLSMSYVQQGVPPPPSQPSPQQ
QYQMLQQSSRMDGSSGPSVGQAGMVPGSEPVLPTGQVMGLGGIPQMGRNMPMAQAGQVSG
MVPGASMNQPSPPPSVPSSIPGQVMPGPFMGAGPPVGSGSQATLNTGVPVSSGSSLIGAP
LVPDNQSRPSYGSQAGIPDSSASAMQSHAYGQQMPIQGQVSQQQPLQMTGELEQQKALLQ
QVLSLTPEQINSLPPEQRQQVLQLQQALRWK
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcactcaacaccgcgcatcccggtgtgtttttgttggaaatataccgtacgat
gcaacggaggaacagcttgtacatatttgcgaggaagtgggtcctgttgtaaatttccgg
ttggtactggatagagagactggcaaacccaaagggtatggattctgcgagttcagagac
gaggaaactgctctgagtgctcgtcggaatcttcaaggttatgagatcaatgggcgtcag
cttcgagtggattttgccgagaatgaaaaaggcggtggcggtgataggaaccgagagcag
cgccaaggcgggcaagttcagcaacaagctgggtatagtacagatacacagaggcaagca
ggtggtcgacaagcaggaagtaatgttgaaatcgatagaagtggggagccaccgatgggt
caagcgtctgcggttgctgccgctcagtttcttactggtactctgggaggcaatcagcaa
cagcaacagcagtatggggtgtccatgaatggacagtcaatgcctgtggccaatggtact
cccgtcagtgtgggcaacgatcccttaacaagtcatttagctggtatgtcgaagcagcag
ctatacgaggtcatggtacagatgaagacaatgattcaacaaaatcaacagcaagctcgc
caaatactgatggctaatccgcaattgacgaaggccatctttcaggcgcagataatgtta
gggatggttcgggctccgccaatggctatgctccctacacagcagcagcaacagcagcag
caacagcagcagcaacagcagcagcaaagagcagcagtccctgcagctcctactaacctg
atgccgcagcctcctctgccgccacaacctagacctgttcaaactccagtaatttctggc
caagttcagcagccgaatcccttgcaaccaatcagttatcatccccagcaaatgcagcag
ccactgcctcaagcaacctttcagcctcaaggaggcatggtacagcaaagcatggggttg
tccatgtcttatgttcaacagggtgtgccacctccaccaagtcagccttctcctcaacag
caataccagatgctccagcagagttctcgtatggatggaagctctggtccttcagttggg
caggctggcatggtccctggatctgagcccgttttgccaacgggtcaagttatgggactc
ggtgggattcctcagatgggtagaaatatgcccatggctcaagcagggcaagttagtggc
atggtacctggtgcgtctatgaatcagccatctccacctccaagcgtaccttcgagtatt
cctggtcaagtaatgcctggacctttcatgggtgctggcccacccgtgggtagtggaagc
caggctactctcaatactggagtgccagtctccagtggttcttcgttgataggagctcct
ttagtgcccgacaaccagtcccggccaagttatgggagtcaggctggaattccagattct
tctgcgtctgctatgcaatcccatgcgtatgggcagcagatgccaatacagggccaagtg
tcccagcaacaacctctgcagatgactggagaattagagcagcagaaggcgttgttgcag
caagtcctgagtctcacccctgaacagataaactcattgcctcctgagcaaaggcaacaa
gttttgcaactgcaacaagctttaaggtggaagtga
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