Physcomitrium patens (spreading earthmoss): 112291376
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Entry
112291376 CDS
T01041
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112291376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppp03021
]
112291376
Enzymes [BR:
ppp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112291376
Transcription machinery [BR:
ppp03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
112291376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
112291376
NCBI-ProteinID:
XP_024394449
UniProt:
A0A2K1JG38
LinkDB
All DBs
Position
14:complement(1906716..1917588)
Genome browser
AA seq
1716 aa
AA seq
DB search
MSRLQGRPEVITNYVEAVGFSFYTDAEKHAISVKQISSPVLFDNLKNPVVGGLYDPALGP
LNQTSTCTTCRQPQLHCTGHFGHIDLILPVYNPLVFKELVKILKWICPFCHHFKMHEQRV
ALFATKLELIAEGRMIDAARLQLPKSDDEEGVGMNLSDEDVETIANDILTTKSGNPRTQW
TSTQLAAARTVISRFKDDMPKTKCENCLAHVPVIKQSGVGKIFQEPLSSSHRSNNIMRGI
RNTVTLRSLRKKSNSDDEMEDVEESINAMDMELDTDAMESMGSAKKGKGCKVLNPKSSGF
KAEDHESWSKKRFLTTSEVREHITLTWQTEKRICALVWGLGEIGGRMGLDKSAKSDASMF
FLQTLLVTPNKFRPPNIMNGDVLEHPQNIFYGRIIRANIAVTEASRGKKGEDGSKLKVDV
GQATRLWLALQNDVCALLDSTTATGLGKDQQGGVRQLLEKKEGLFRMNMMGKRVNYACRS
VISPDPYIAVNEIGIPPYFATRLTYPERVTPWNVHQMREAVENGPQVHPGATHVEDEEGR
IIGLDKLPKHKRTALAKTLLSTPGMAVRGTNVDGGRSVGKTVYRHLRDGDVLLVNRQPTL
HKPGVMAHKARVLKGEKTLRLHYANCSTYNADFDGDEMNVHFPQEELGRAEAYEIVNADQ
QYVVPTSGDPIRGLIQDHIVSATLLTKRDTFLSKEDYHQLVYSACVSMNAANFKRKNKNV
ALSLIDRDLPIIPLPPAVMKPYPLWTGKQVLTTVFNHITHGFPSFTLKAPIKVSGDYWGK
TSGELELIVRDNELVCGVIDKAQFGKFGIVHTFQELYGPEMAGRLLSVFSRLFTAYLQMH
GFTCGFGDLLLVPKSEKSRRNKLKETDDLGNKINARFVGVDEEGELNMEEIRDEVEKRIQ
SKGDAASARLDMLMTSALNRITSDINNTIFPKGLMKPFPANCLSLMTITGAKGGLVNFTQ
ISSLLGQQELEGKRVPRMSSGKTLPCFPPWDPSARAGGFIGDRFLTGLRPQEYYFHCMAG
RDGLVDTAVKTSRSGYLQRCLMKNLESLKVHYDYTVRDSDGSIVQFRYGEDGIDVTKTSH
LLKFELLATNQDLVSLRLGKDPNERPKRNKKDKVVENKADFEGMNNQAETLEAVSMAFEA
KVDGFIANATISKAERKRLHLRSRKDRENFRYLMSLKYASSLAQPGEPVGCLAAQSVGEP
STQMTLNTFHFAGRGEMNVTLGIPRLREILMTASADISTPIMTCPLLIGKTREDAERLAM
KLRKLRLIDLLENVEVGEVPFAVQNGQPSKIFKIRLKVYPPHRYPPHLDLESDEIEDVIR
DQFIPRLVKEMKKYFQSRSGTRKENIIHVVQPSQLGEGSGAEAFDNGPDDGEEPKGRKKG
KDVEAGEMQEDEDEEEGGEEEGADAEKRRGQDNDERGYDDDVDDDEMEIAEKTKEKDLKE
QAVLGDEDDEQEVVENMDRDNLYDDEADRGDTDVVPRTPDVKKRDSASKIRSTSKSQGPQ
KEVDGADSLTINGNVFEMKFTVKLSTPHIILAEVVEKVASQVSVRAVAGIEKCAVIDYKG
DSSNPALQTDGVNFEGIWTLSDDLDLNRLTTNNVASMLKVYGVEACRATILSEVQAVFGS
YGISVNPRHLALIADFMTFQGGYRACNRLGINSSPSPFLKMSFETATVFLMDATLQKHSD
YLESPSARIVMGRIVEMGTGSFDLLQNIDGMIAPQA
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtttgcaaggccgtcccgaggtcatcaccaattatgtggaggcggtgggattc
tcattttacactgacgctgaaaaacatgctattagtgtgaagcagatcagcagtcccgtg
ctgttcgacaatttgaaaaaccctgttgtagggggactttacgaccctgcgcttggcccg
ttgaatcaaacctcaacatgtacgacctgtcgtcaaccacaattgcactgcacaggccac
ttcgggcacatagacctcatactgcctgtttacaatcccttagtgttcaaagaactcgtg
aagatcctcaaatggatctgccctttctgtcatcatttcaaaatgcacgagcagcgcgtg
gcattatttgccacaaaactagagttgatcgccgaaggccgaatgattgacgctgccaga
ttacaacttccaaaatcagatgatgaggaaggtgttggtatgaatctttctgatgaggat
gttgaaacaattgccaacgatatacttacaactaagagtggaaaccccagaacgcaatgg
acttccacccaactcgcagctgctcggactgttatttctcgcttcaaagatgacatgccc
aaaaccaagtgtgagaattgcttggcacacgtcccggttatcaagcaatctggagtggga
aaaatatttcaggaaccactgagcagcagtcatcgctccaacaacatcatgcgaggaata
agaaataccgtgactctgcgtagtcttagaaaaaaatcaaactcagatgatgaaatggag
gatgtcgaggagtctattaatgctatggacatggagctggacacagatgcaatggagtct
atgggatcagccaagaaaggtaagggatgtaaagtcttaaatccgaagtcgagtggtttc
aaagcggaagatcacgagagctggagcaagaagaggtttctaaccacgtctgaggtcaga
gaacacatcaccttaacatggcaaactgaaaagaggatctgcgcccttgtttggggtttg
ggtgagattggtggccgtatgggtctggataaaagtgcgaagtcggatgcctctatgttc
ttcttacaaacgcttttggtcacaccaaacaagttccggccaccaaatataatgaacggt
gatgttctggaacatccacaaaacatattctatggtcgtatcattcgagccaatattgca
gtaacagaagcttcaaggggcaagaaaggcgaggatggttccaaattgaaagttgacgtt
ggtcaagctactaggctatggttggccttgcagaatgatgtctgtgcccttcttgatagt
accacagcaactgggctggggaaagatcaacaaggtggcgttaggcaacttcttgagaaa
aaagaagggctattccgcatgaacatgatgggtaaacgtgtgaattatgcgtgccggtct
gtaatttcaccggacccttacatcgctgtgaatgaaattggcattccgccatattttgcg
actcgcttaacgtacccagagagagtgacgccgtggaatgtgcatcaaatgagggaggca
gttgagaatggtcctcaggtgcatcctggtgcaactcatgtcgaagatgaggagggacga
attattgggttggataaacttcctaaacacaagaggacagcattggccaaaacccttctt
tcaactcctggaatggcagtcaggggtacgaacgttgatggaggcaggtcagttggaaag
acagtgtatagacatctgcgggatggagacgtgttgcttgtgaatcgtcagcccacactg
cacaaaccaggagtaatggcccacaaagcacgagtgctcaaaggagagaagactttgcgt
ttgcactatgccaactgcagtacatataatgcagattttgatggtgatgaaatgaatgtc
cattttccacaagaggaactaggacgtgcagaggcttatgaaattgtgaacgcggatcaa
cagtatgtcgtcccgactagtggtgaccctattcgtggacttattcaggaccatattgtc
agtgcgaccttacttacaaagcgagacacatttttgagcaaagaggattatcaccagtta
gtgtactcggcatgtgtttcgatgaatgctgctaacttcaagcggaagaacaagaatgtt
gccctgagtttaattgatcgagaccttccaattatccctcttcctcccgctgttatgaaa
ccttatcccttatggactggaaagcaagtgttgacaactgttttcaaccacataactcat
gggtttccatctttcactttgaaagcaccgatcaaagtttctggagattactggggcaag
acaagcggtgagcttgaactaattgtgagagacaatgagcttgtttgtggtgttatcgac
aaggctcagtttggaaaattcggaatcgttcacactttccaggagctttatggacctgag
atggctggccgtctattatctgttttcagccgactcttcactgcctaccttcagatgcat
gggtttacttgtggattcggggaccttcttttagttcctaaatctgagaagtcgagacgg
aataagcttaaagaaactgacgatcttggcaacaaaatcaatgcacgctttgttggcgta
gatgaagaaggagagcttaacatggaggagatcagagatgaagtggagaagagaattcaa
agtaaaggagatgctgcaagcgcacggcttgacatgcttatgactagtgctcttaaccgc
atcacttctgatattaataatacaatattccccaaaggactgatgaagccttttcccgct
aactgcctgtctcttatgaccatcactggtgctaagggaggactggtgaactttacacaa
atctcgtcattgcttgggcagcaggagcttgagggtaagcgagtgcctcgtatgagttct
ggcaagacgttgccttgttttcctccatgggacccaagtgcgcgtgcaggaggctttatt
ggagatcgtttcttgactggacttcgtcctcaagagtattatttccattgtatggcaggc
cgagatggattggttgatacggctgtcaaaacttctcgaagtggttacttacagagatgt
ctcatgaaaaatttagagtcattgaaagtacattatgattacactgtacgtgactctgat
ggttcaatagtgcagtttcggtacggagaagatggcatcgatgtcacgaagacgagccat
ctgttaaaattcgagcttttggcgactaatcaagatcttgtctcattgcgactcggtaaa
gatccgaacgaacggcctaaacgaaataaaaaggacaaagtcgtagaaaacaaagctgac
tttgaaggaatgaataaccaagctgaaacattggaagctgtctctatggcttttgaagcg
aaagtggatggttttattgccaatgccacaatatcgaaggcagaaaggaagcgattgcac
cttagaagtcgcaaagatagggaaaattttaggtatttgatgtcactgaagtatgcgtcc
agtcttgcacaacctggtgaacctgttggatgccttgctgcacagtcagtgggtgaacct
tctactcagatgacgttaaacacatttcattttgctggacgaggagaaatgaatgtgaca
cttggtatacctcgattgcgagaaatcttaatgactgcatcagctgatatttctacaccc
atcatgacctgcccattgttgatcgggaaaaccagggaggatgccgaaagactcgcgatg
aagttgaggaagctgcgtttgatagatttactagaaaatgtggaagttggtgaagttcct
tttgctgttcaaaacggccaaccctctaagattttcaagatccgattgaaagtctatcct
cctcaccggtacccgccgcacttggatttggagtctgatgagattgaggatgttattcga
gaccagttcataccaaggctagtgaaagagatgaagaaatactttcagtccagatccggg
acgaggaaggaaaatattattcatgttgttcaaccatcccagttaggagaaggatctgga
gcagaagcttttgataacggtcctgatgatggagaggaaccgaaggggaggaagaaagga
aaggatgtcgaagcaggagaaatgcaggaagatgaagatgaggaagagggtggtgaggaa
gaaggtgcagatgctgagaagcggagaggccaggacaacgatgagagaggatatgatgat
gatgtggatgatgatgagatggagatcgctgagaaaaccaaggaaaaggatttgaaagaa
caggctgttcttggagacgaagacgatgaacaggaagtcgtggagaatatggatagagat
aatttatacgacgacgaagctgataggggtgataccgacgtggtgcctcgaacaccagat
gtgaagaagagagattctgcttcaaagataagatccacttccaagagccaggggccgcag
aaggaggtcgatggggcagattctttgactattaatgggaatgtgttcgagatgaagttt
acagtgaaactgtccactcctcatattatactggctgaggttgtggagaaggtggcatcc
caggtttctgtgcgagctgtggctggcatcgagaaatgtgctgtgatcgattacaaggga
gattcctctaatcctgcattgcagacagacggcgtcaattttgaggggatatggacactc
tctgatgatctagatctcaaccggctgaccaccaataatgtggcctctatgctcaaggtc
tatggagtagaggcgtgtcgagctacgatcctctctgaagtacaggctgtttttggatca
tatggaatttctgtaaaccctaggcacttggcattgattgctgatttcatgacgttccaa
ggcggatatcgggcttgcaataggttgggtattaactcaagcccgtcgccgttccttaaa
atgagcttcgaaacagccactgtgtttcttatggacgcaaccctgcagaagcattcagat
tacttggagtcaccctctgcaaggattgttatggggagaattgttgagatgggtactggt
tccttcgaccttctgcagaatattgatggtatgattgcaccacaagcttaa
DBGET
integrated database retrieval system