KEGG   Physcomitrium patens (spreading earthmoss): 112291376
Entry
112291376         CDS       T01041                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112291376
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppp03021]
    112291376
Enzymes [BR:ppp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     112291376
Transcription machinery [BR:ppp03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     112291376
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 112291376
NCBI-ProteinID: XP_024394449
UniProt: A0A2K1JG38
LinkDB
Position
14:complement(1906716..1917588)
AA seq 1716 aa
MSRLQGRPEVITNYVEAVGFSFYTDAEKHAISVKQISSPVLFDNLKNPVVGGLYDPALGP
LNQTSTCTTCRQPQLHCTGHFGHIDLILPVYNPLVFKELVKILKWICPFCHHFKMHEQRV
ALFATKLELIAEGRMIDAARLQLPKSDDEEGVGMNLSDEDVETIANDILTTKSGNPRTQW
TSTQLAAARTVISRFKDDMPKTKCENCLAHVPVIKQSGVGKIFQEPLSSSHRSNNIMRGI
RNTVTLRSLRKKSNSDDEMEDVEESINAMDMELDTDAMESMGSAKKGKGCKVLNPKSSGF
KAEDHESWSKKRFLTTSEVREHITLTWQTEKRICALVWGLGEIGGRMGLDKSAKSDASMF
FLQTLLVTPNKFRPPNIMNGDVLEHPQNIFYGRIIRANIAVTEASRGKKGEDGSKLKVDV
GQATRLWLALQNDVCALLDSTTATGLGKDQQGGVRQLLEKKEGLFRMNMMGKRVNYACRS
VISPDPYIAVNEIGIPPYFATRLTYPERVTPWNVHQMREAVENGPQVHPGATHVEDEEGR
IIGLDKLPKHKRTALAKTLLSTPGMAVRGTNVDGGRSVGKTVYRHLRDGDVLLVNRQPTL
HKPGVMAHKARVLKGEKTLRLHYANCSTYNADFDGDEMNVHFPQEELGRAEAYEIVNADQ
QYVVPTSGDPIRGLIQDHIVSATLLTKRDTFLSKEDYHQLVYSACVSMNAANFKRKNKNV
ALSLIDRDLPIIPLPPAVMKPYPLWTGKQVLTTVFNHITHGFPSFTLKAPIKVSGDYWGK
TSGELELIVRDNELVCGVIDKAQFGKFGIVHTFQELYGPEMAGRLLSVFSRLFTAYLQMH
GFTCGFGDLLLVPKSEKSRRNKLKETDDLGNKINARFVGVDEEGELNMEEIRDEVEKRIQ
SKGDAASARLDMLMTSALNRITSDINNTIFPKGLMKPFPANCLSLMTITGAKGGLVNFTQ
ISSLLGQQELEGKRVPRMSSGKTLPCFPPWDPSARAGGFIGDRFLTGLRPQEYYFHCMAG
RDGLVDTAVKTSRSGYLQRCLMKNLESLKVHYDYTVRDSDGSIVQFRYGEDGIDVTKTSH
LLKFELLATNQDLVSLRLGKDPNERPKRNKKDKVVENKADFEGMNNQAETLEAVSMAFEA
KVDGFIANATISKAERKRLHLRSRKDRENFRYLMSLKYASSLAQPGEPVGCLAAQSVGEP
STQMTLNTFHFAGRGEMNVTLGIPRLREILMTASADISTPIMTCPLLIGKTREDAERLAM
KLRKLRLIDLLENVEVGEVPFAVQNGQPSKIFKIRLKVYPPHRYPPHLDLESDEIEDVIR
DQFIPRLVKEMKKYFQSRSGTRKENIIHVVQPSQLGEGSGAEAFDNGPDDGEEPKGRKKG
KDVEAGEMQEDEDEEEGGEEEGADAEKRRGQDNDERGYDDDVDDDEMEIAEKTKEKDLKE
QAVLGDEDDEQEVVENMDRDNLYDDEADRGDTDVVPRTPDVKKRDSASKIRSTSKSQGPQ
KEVDGADSLTINGNVFEMKFTVKLSTPHIILAEVVEKVASQVSVRAVAGIEKCAVIDYKG
DSSNPALQTDGVNFEGIWTLSDDLDLNRLTTNNVASMLKVYGVEACRATILSEVQAVFGS
YGISVNPRHLALIADFMTFQGGYRACNRLGINSSPSPFLKMSFETATVFLMDATLQKHSD
YLESPSARIVMGRIVEMGTGSFDLLQNIDGMIAPQA
NT seq 5151 nt   +upstreamnt  +downstreamnt
atgagtcgtttgcaaggccgtcccgaggtcatcaccaattatgtggaggcggtgggattc
tcattttacactgacgctgaaaaacatgctattagtgtgaagcagatcagcagtcccgtg
ctgttcgacaatttgaaaaaccctgttgtagggggactttacgaccctgcgcttggcccg
ttgaatcaaacctcaacatgtacgacctgtcgtcaaccacaattgcactgcacaggccac
ttcgggcacatagacctcatactgcctgtttacaatcccttagtgttcaaagaactcgtg
aagatcctcaaatggatctgccctttctgtcatcatttcaaaatgcacgagcagcgcgtg
gcattatttgccacaaaactagagttgatcgccgaaggccgaatgattgacgctgccaga
ttacaacttccaaaatcagatgatgaggaaggtgttggtatgaatctttctgatgaggat
gttgaaacaattgccaacgatatacttacaactaagagtggaaaccccagaacgcaatgg
acttccacccaactcgcagctgctcggactgttatttctcgcttcaaagatgacatgccc
aaaaccaagtgtgagaattgcttggcacacgtcccggttatcaagcaatctggagtggga
aaaatatttcaggaaccactgagcagcagtcatcgctccaacaacatcatgcgaggaata
agaaataccgtgactctgcgtagtcttagaaaaaaatcaaactcagatgatgaaatggag
gatgtcgaggagtctattaatgctatggacatggagctggacacagatgcaatggagtct
atgggatcagccaagaaaggtaagggatgtaaagtcttaaatccgaagtcgagtggtttc
aaagcggaagatcacgagagctggagcaagaagaggtttctaaccacgtctgaggtcaga
gaacacatcaccttaacatggcaaactgaaaagaggatctgcgcccttgtttggggtttg
ggtgagattggtggccgtatgggtctggataaaagtgcgaagtcggatgcctctatgttc
ttcttacaaacgcttttggtcacaccaaacaagttccggccaccaaatataatgaacggt
gatgttctggaacatccacaaaacatattctatggtcgtatcattcgagccaatattgca
gtaacagaagcttcaaggggcaagaaaggcgaggatggttccaaattgaaagttgacgtt
ggtcaagctactaggctatggttggccttgcagaatgatgtctgtgcccttcttgatagt
accacagcaactgggctggggaaagatcaacaaggtggcgttaggcaacttcttgagaaa
aaagaagggctattccgcatgaacatgatgggtaaacgtgtgaattatgcgtgccggtct
gtaatttcaccggacccttacatcgctgtgaatgaaattggcattccgccatattttgcg
actcgcttaacgtacccagagagagtgacgccgtggaatgtgcatcaaatgagggaggca
gttgagaatggtcctcaggtgcatcctggtgcaactcatgtcgaagatgaggagggacga
attattgggttggataaacttcctaaacacaagaggacagcattggccaaaacccttctt
tcaactcctggaatggcagtcaggggtacgaacgttgatggaggcaggtcagttggaaag
acagtgtatagacatctgcgggatggagacgtgttgcttgtgaatcgtcagcccacactg
cacaaaccaggagtaatggcccacaaagcacgagtgctcaaaggagagaagactttgcgt
ttgcactatgccaactgcagtacatataatgcagattttgatggtgatgaaatgaatgtc
cattttccacaagaggaactaggacgtgcagaggcttatgaaattgtgaacgcggatcaa
cagtatgtcgtcccgactagtggtgaccctattcgtggacttattcaggaccatattgtc
agtgcgaccttacttacaaagcgagacacatttttgagcaaagaggattatcaccagtta
gtgtactcggcatgtgtttcgatgaatgctgctaacttcaagcggaagaacaagaatgtt
gccctgagtttaattgatcgagaccttccaattatccctcttcctcccgctgttatgaaa
ccttatcccttatggactggaaagcaagtgttgacaactgttttcaaccacataactcat
gggtttccatctttcactttgaaagcaccgatcaaagtttctggagattactggggcaag
acaagcggtgagcttgaactaattgtgagagacaatgagcttgtttgtggtgttatcgac
aaggctcagtttggaaaattcggaatcgttcacactttccaggagctttatggacctgag
atggctggccgtctattatctgttttcagccgactcttcactgcctaccttcagatgcat
gggtttacttgtggattcggggaccttcttttagttcctaaatctgagaagtcgagacgg
aataagcttaaagaaactgacgatcttggcaacaaaatcaatgcacgctttgttggcgta
gatgaagaaggagagcttaacatggaggagatcagagatgaagtggagaagagaattcaa
agtaaaggagatgctgcaagcgcacggcttgacatgcttatgactagtgctcttaaccgc
atcacttctgatattaataatacaatattccccaaaggactgatgaagccttttcccgct
aactgcctgtctcttatgaccatcactggtgctaagggaggactggtgaactttacacaa
atctcgtcattgcttgggcagcaggagcttgagggtaagcgagtgcctcgtatgagttct
ggcaagacgttgccttgttttcctccatgggacccaagtgcgcgtgcaggaggctttatt
ggagatcgtttcttgactggacttcgtcctcaagagtattatttccattgtatggcaggc
cgagatggattggttgatacggctgtcaaaacttctcgaagtggttacttacagagatgt
ctcatgaaaaatttagagtcattgaaagtacattatgattacactgtacgtgactctgat
ggttcaatagtgcagtttcggtacggagaagatggcatcgatgtcacgaagacgagccat
ctgttaaaattcgagcttttggcgactaatcaagatcttgtctcattgcgactcggtaaa
gatccgaacgaacggcctaaacgaaataaaaaggacaaagtcgtagaaaacaaagctgac
tttgaaggaatgaataaccaagctgaaacattggaagctgtctctatggcttttgaagcg
aaagtggatggttttattgccaatgccacaatatcgaaggcagaaaggaagcgattgcac
cttagaagtcgcaaagatagggaaaattttaggtatttgatgtcactgaagtatgcgtcc
agtcttgcacaacctggtgaacctgttggatgccttgctgcacagtcagtgggtgaacct
tctactcagatgacgttaaacacatttcattttgctggacgaggagaaatgaatgtgaca
cttggtatacctcgattgcgagaaatcttaatgactgcatcagctgatatttctacaccc
atcatgacctgcccattgttgatcgggaaaaccagggaggatgccgaaagactcgcgatg
aagttgaggaagctgcgtttgatagatttactagaaaatgtggaagttggtgaagttcct
tttgctgttcaaaacggccaaccctctaagattttcaagatccgattgaaagtctatcct
cctcaccggtacccgccgcacttggatttggagtctgatgagattgaggatgttattcga
gaccagttcataccaaggctagtgaaagagatgaagaaatactttcagtccagatccggg
acgaggaaggaaaatattattcatgttgttcaaccatcccagttaggagaaggatctgga
gcagaagcttttgataacggtcctgatgatggagaggaaccgaaggggaggaagaaagga
aaggatgtcgaagcaggagaaatgcaggaagatgaagatgaggaagagggtggtgaggaa
gaaggtgcagatgctgagaagcggagaggccaggacaacgatgagagaggatatgatgat
gatgtggatgatgatgagatggagatcgctgagaaaaccaaggaaaaggatttgaaagaa
caggctgttcttggagacgaagacgatgaacaggaagtcgtggagaatatggatagagat
aatttatacgacgacgaagctgataggggtgataccgacgtggtgcctcgaacaccagat
gtgaagaagagagattctgcttcaaagataagatccacttccaagagccaggggccgcag
aaggaggtcgatggggcagattctttgactattaatgggaatgtgttcgagatgaagttt
acagtgaaactgtccactcctcatattatactggctgaggttgtggagaaggtggcatcc
caggtttctgtgcgagctgtggctggcatcgagaaatgtgctgtgatcgattacaaggga
gattcctctaatcctgcattgcagacagacggcgtcaattttgaggggatatggacactc
tctgatgatctagatctcaaccggctgaccaccaataatgtggcctctatgctcaaggtc
tatggagtagaggcgtgtcgagctacgatcctctctgaagtacaggctgtttttggatca
tatggaatttctgtaaaccctaggcacttggcattgattgctgatttcatgacgttccaa
ggcggatatcgggcttgcaataggttgggtattaactcaagcccgtcgccgttccttaaa
atgagcttcgaaacagccactgtgtttcttatggacgcaaccctgcagaagcattcagat
tacttggagtcaccctctgcaaggattgttatggggagaattgttgagatgggtactggt
tccttcgaccttctgcagaatattgatggtatgattgcaccacaagcttaa

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