Physcomitrium patens (spreading earthmoss): 112291473
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Entry
112291473 CDS
T01041
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppp03009
]
112291473
Enzymes [BR:
ppp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112291473
Ribosome biogenesis [BR:
ppp03009
]
Eukaryotic type
Pre-60S particles
Helicases
112291473
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
112291473
NCBI-ProteinID:
XP_024394674
LinkDB
All DBs
Position
14:complement(4680690..4683594)
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AA seq
847 aa
AA seq
DB search
MDFPKEDMEGVEAMEYPSAGFQEFDMKESLSATQLKLKKKLEKKKKSGGFETLGLSLPVF
RAVKRKGYRIPTPIQRKTLPLILAGYDVVAMARTGSGKTAAFLIPMIEKLVEHSNNAGAR
AVILSPSRELALQTFKFCKELSKYTDLKIAILVGGDSMEAQFEQLAGNPDVIIATPGRLM
HHLSEVEGMSLRTVEYIVFDEADRLFEMGFAEQLRQIMSHLGESRQVLLFSATLPRLLAD
FAKAGLRDPHLVRLDVESRISPDLQLSFFTVRHDEKPAALVHLVREVIPAEQQTIVFVAT
KHHVEFLYELLKTEGIDISVVYGSMDQAARKIHIAKFRAGKTKLLLVTDVAARGIDIPLL
DNVINYDFPPKPKLFVHRVGRAARAGRTGTSYSFVTSEEMPYVLDLHLYLSKGIRPAPLE
EAIVADREKVMADLEAASKRGETIFGRMPQSVLDFGMDRLREVISNNDDLIGLQKAAKNA
YKLYVKTRPPAALESAKRAKGFAREGLHPSLRQQLRNVEAEVAAFTERLKAIRPRQTVLE
AEAEAAKGKNKNVPIAQVVEIMKRKREVHEHVIAAAAQQRAAAKAFEKSREDTTEATAEE
QPTMKRRRKGAKDTSDVKQKLIPKSYRDEEFFIEAVPRNRHMEAGLSVQGGDGFGRSRMD
TEVLDLIADDAAGVQKQNATYHWDKKNKKFVKLNKGEQVTASGKIKTESGSKVNAGNHGL
YKKWKERSHMHVPTHGEADDAPGALDGAPTSSRGGRGGRGGRGSSRGDSRGSLPNANVKN
ELRGVEEVRKERQKKAMRSARGGGKGGRGGGGGSGRGGGRGGSGGGRGGRGSSRGGRGGG
RGGRGRK
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggatttcccaaaagaagatatggaaggggttgaggcgatggagtacccgagcgctgga
ttccaggaattcgacatgaaggagagtctgtctgcaacacagctgaagttgaagaagaag
ttggagaagaagaagaaatcaggggggtttgagactttagggttaagtctgcctgtgttt
cgtgctgtgaagcgcaaagggtataggattcccactccaatccagaggaaaaccttgccg
cttattctagcgggttacgatgtggtggctatggcccggacggggtccgggaagacggcg
gcctttctgattccgatgattgagaagctggtggagcattcgaacaacgctggggctaga
gctgttatattgtctccctctagagagctcgcgctacagacatttaagttctgtaaggag
cttagcaagtacactgatttgaagatcgcaattctggtgggaggagatagcatggaggcg
caatttgaacaactagcaggtaatcctgatgtgatcattgcaactcccggacgacttatg
caccatctttctgaggttgaaggaatgtcactgcggactgttgaatatattgtgtttgat
gaggcggaccggctctttgagatgggattcgctgagcaacttcgacaaatcatgtctcat
ttaggagaatccagacaagttctcttgtttagtgcgactctgccacgtttgctagcagat
tttgccaaagcaggcttaagagatccgcacttagttcgtcttgatgtggaaagtagaata
agcccggacttgcagctgtcctttttcactgttcgccatgacgaaaagccagctgctctc
gttcatttagtgcgggaagtgattccagctgagcagcaaacgattgtctttgttgctact
aaacatcacgttgagtttctgtacgagttgctgaaaactgagggcatcgacatatccgtt
gtctatggttctatggaccaagcagcgcgtaaaattcacattgcaaagtttcgtgctggg
aagacgaagttgcttctggttacggatgttgcagctcgaggtattgatattcctctttta
gacaatgttattaactatgacttccctccgaagcccaagcttttcgttcatagagtagga
cgtgcggctcgtgcggggcgaactggaacttcatactcatttgttacatcggaagagatg
ccgtatgttctcgacctacatctgtacctgtctaaaggtatacgcccggcaccgttagag
gaagctatagtggcagatcgagaaaaggtgatggctgacttggaagctgcctcaaagaga
ggagagacgatttttgggcgaatgcctcaatcggtactcgactttggaatggatagattg
agggaggttatctcaaacaatgatgatctcatcggtcttcagaaggcagcgaagaacgca
tacaagctttacgtcaagacacggcctcccgctgctctagagtctgctaaacgtgcgaag
ggtttcgctcgtgaaggtcttcatccttccttgagacagcaattgcggaacgtagaagca
gaagttgctgcttttaccgagcggttgaaggccatcaggccaaggcagacagtattggag
gcggaggctgaagctgccaagggcaagaataaaaatgtgccgatcgcgcaagtggtggaa
attatgaagcgaaagcgggaggtgcatgaacatgttatcgctgctgccgctcaacaacgt
gcagctgccaaagccttcgaaaagagtcgtgaagatacgactgaagcaacagctgaggag
cagccaaccatgaaacgtaggcggaagggagcgaaagacaccagtgatgtcaaacagaag
cttatccctaaaagctacagagacgaagagtttttcatagaggctgttccacgtaaccgg
cacatggaggcgggtctttcggttcaaggtggtgatggctttggtcgtagcagaatggat
actgaagtgctggacctcatagcagatgatgcagccggggtgcagaaacagaacgctaca
taccattgggataagaagaacaagaagtttgttaaactcaacaaaggggagcaagtcaca
gcttctggaaagatcaagactgaaagtggttctaaggtcaatgcaggcaaccatggcctc
tacaagaaatggaaagagcgttctcatatgcatgttcccactcatggtgaagcagatgac
gcccctggtgctctggatggtgcacccactagcagcagaggcgggaggggcgggagagga
ggccgtggatctagtcgtggggatagtcgtggaagtttacccaacgccaatgtgaagaac
gaacttcgtggcgtggaggaggtgcgtaaagagaggcaaaagaaggcaatgagaagcgca
cgaggtggaggtaagggtggacgcggtggtggtggtggaagtggacgcggtggcggtaga
ggtggcagcggtggtggaagaggtggcagaggttcatcaagaggtggacgaggtggtgga
agagggggacgagggcgaaagtag
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