Physcomitrium patens (spreading earthmoss): 112291661
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Entry
112291661 CDS
T01041
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
112291661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112291661
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
112291661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
Gasdermin_C
KIF9
Exonuc_VII_L
DUF641
Motif
Other DBs
NCBI-GeneID:
112291661
NCBI-ProteinID:
XP_024395185
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Position
14:13725378..13728081
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AA seq
332 aa
AA seq
DB search
MAEFDNKTCTRLEVQECIENRNLNKSLFVKSEWKPTRLDPMSFFLFVSDGQRAWTFDGSE
SFVKERAEAWDKKPRWVMEKIQFYLSVAQPGVNYRFTKIRDLHRKLSFDVQDKESDLYLT
ANLSMLSASDPERITCDLLEFLHDSNCRLTESFLKKCRDYDRLRSESEVLVEQNKRFKDL
KSQTQEVMYKKFVAVLNSKKAKLKELKKELEHCKDKQNVNENNDRGDTTSSSDDEEDESD
HQLPSPSERFEGGERSGERLISLDARKQCPIATSAANVVHADPDATQPILDEIENDFLIP
DLPPKDDGRSSAVSALLQDTPYTGLPRKRRRN
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcggagttcgacaataaaacgtgcacccgacttgaggtccaagagtgcattgagaac
aggaatttgaacaagtcgttgtttgtgaaaagtgaatggaagccgacgaggctcgacccg
atgagcttctttcttttcgtctctgatggacagcgagcttggacgtttgatggctccgag
tcgtttgtgaaggagagggctgaagcttgggacaagaagccccgttgggtgatggagaag
atccaattttatctcagtgtggcacaacctggcgtaaattatcggtttactaaaattcga
gaccttcacagaaagttgtcttttgatgtccaagacaaggaatcagatctttacctaaca
gctaatttatcaatgctgagtgcgtcggatcccgaacgcatcacctgcgacttgctggag
tttctacacgacagtaattgccgactgacggagagctttctaaagaagtgcagggattat
gataggctgcgaagtgaaagcgaagtcctcgtggaacaaaataagcgctttaaagatttg
aaaagtcagactcaagaagtcatgtacaagaagtttgtggcagtcttgaacagcaaaaag
gcaaaattgaaggagctgaagaaggagcttgaacattgtaaagacaagcagaatgtcaat
gaaaacaatgatagaggcgacaccactagttccagcgacgacgaagaagacgaaagcgac
caccaactgccatcaccatcagaaaggttcgagggtggtgagagatctggtgaaaggtta
atcagtttggacgcacgcaaacaatgccccattgccacctccgctgcaaatgtggttcat
gctgatccagacgcaactcaacccattttggacgaaattgaaaacgattttctgattcct
gatttgccaccgaaggacgatggtcgcagcagtgcggtatcggccttgcttcaagacaca
ccctacacgggcttacctaggaaacggcgtcgaaattga
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