KEGG   Physcomitrium patens (spreading earthmoss): 112291733
Entry
112291733         CDS       T01041                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112291733
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ppp03041]
    112291733
Spliceosome [BR:ppp03041]
 Complex A
  U2 snRNP components
   U2 related factors
    112291733
 Complex B
    112291733
SSDB
Motif
Pfam: RRM_1 RBD_DEAH11
Other DBs
NCBI-GeneID: 112291733
NCBI-ProteinID: XP_024395329
LinkDB
Position
14:3192309..3200733
AA seq 1170 aa
MTSVTSNLTNFMDLKEVSATLDKLKENALKKIRSINDIQDDDFENNYNHESQLDFDANIY
KNYNMINPIKETSNEDVYFNKYNCSNLKIYNLLKSKASNKGQEMNNIVEHDLVNIDECFF
DKYEQLYKSPCSYTKQYKKSGCNDIGGALEDENGKFQDIPQVYSERHVSYDPSIKIPSMK
ISEVLTTLIVNPTKQLSESIPAISTDPDMNWTPHNGVLHFATNELGDICCKSTDALDLND
GTANDISDEESKHRSGDSCNGFLRNKERLRDIDAIEEMAQKEINLIQNCSCPTQNGVVDL
IIADERESPSRRDSMPKTKTVLKDQTSELGDGTRLDNNRGGGGNTKAQKVSSGLDDSNVT
DSETVRCEQMDRTSPKDVKRKGFHQEHSCHVDSNSRKNECEDRHFSRINNAAATTTTSSR
YVRGRVEGFRGREKRFNDRCISSRYPRSESQVFVRNDHHSHIFPKRAKFAEDGHNFVHRR
HGIDARDARKRDRYGYGAKRRSYGGKSRDDHESTSQRSSPSAHREKPHGPRKRLKKSSSP
PSHEDGKKLHRNIDGSDLENSPTQGHCDGRFNRRFGGSSGLGGYSPRRRRSEAAVKTPSP
PPRSPIRLKTRAWDMVPAGIDSKVVAALAAAHTAQQQQQQQVSMAPLVPMSVMTAPHKLN
AAAAVAAAAAAASQSHLSAMLPSLLLQQQQQVQQQVNGVSGSGGGSGGGGLSTVTLTQAT
RSIRRLYVGNVPSTVSDGELMEFMNAAMLSANAHHIPGTKPCINCIVNIEKAYAFAEFIT
PEDATTALGFDGVTLHGTILKIRRPKDFIAPEHGGCPIAQPVINLVGDVVLDSPHKVFVG
GISSLLTPDKVKEIITAFGQLKSFHWKTMHHNNGGCSIAFFEYLDPTVTHQACKGLNGMN
LGGQVLTVLQATPDAKYEVFSKNPPFYDIPEEALPLLETPTNVLEIHNLVSEEEVLHMQD
KDVRKLMEDVRIECKRFGNIRSIQIVKPSIPQVCKTIDQKEEKILMGTNGEPSNNEEESN
IPTIAITNETCELKDMERIPQSIANNCGNDVEDSTNKEINNMEEIKLEDGCKDVDCNTKE
EIEKQPLLQISTSISSSLNPNNLLGSNTCKMSRMEPLKAGNIYVEYSRDESACHAAHALH
GRGYGNAKVSVAFVSPRFYLKHFGRESAAV
NT seq 3513 nt   +upstreamnt  +downstreamnt
atgacaagtgtgacgtccaatctcacaaatttcatggacttgaaagaggttagtgcgact
cttgacaaattgaaagaaaatgcattaaaaaagatccgatcaataaatgatattcaagat
gatgattttgaaaacaactataaccatgaaagtcaattggattttgatgcaaacatatac
aaaaattataatatgatcaatcccattaaagaaacatcaaatgaggacgtgtattttaac
aaatacaattgctcaaaccttaaaatatacaacctactcaaaagcaaggcttcaaataaa
gggcaagagatgaataatattgtggagcatgatttagtgaacatagatgaatgcttcttt
gacaagtatgaacaactttacaagagcccttgttcatacacaaaacaatataagaagagt
ggttgtaatgatataggaggagctcttgaggatgagaatgggaagtttcaagatataccg
caagtttattcagaacgtcatgtttcttatgacccaagcataaaaattccaagtatgaag
atcagtgaagttcttacaacattaattgtaaaccccacaaagcaattatctgaatccatt
cctgctatctcaacagatcctgatatgaattggactccacacaatggtgtattacatttt
gcaacaaatgaactcggagacatttgctgcaagagcaccgatgctcttgacttgaatgac
ggcacagcaaacgatatcagcgacgaggaatcaaagcacagatccggagattcctgcaat
ggctttctacgcaacaaagaaaggctccgtgatatcgacgctattgaagagatggcgcaa
aaagagattaatttaattcaaaactgttcttgtcctacacagaatggtgtcgtggatttg
ataatagctgacgaacgtgagtctccgagtagaagagacagtatgccgaagacgaagact
gttttgaaagatcaaacttctgaactcggtgacggaacaaggctcgacaacaaccgtgga
ggcggtgggaataccaaggcacagaaagtgagcagcggtttggatgacagtaatgtgacg
gactcggagactgttcgatgcgagcaaatggataggaccagtccgaaagatgtgaagaga
aaaggttttcatcaggagcatagttgtcacgttgattccaattcgaggaagaatgaatgt
gaggatagacacttcagtagaataaataatgctgctgctaccactactaccagtagcagg
tacgtgagaggaagagttgagggatttagaggcagagagaaaagattcaatgatcgctgt
atttcatcccgttatccgagaagcgaatcgcaagtatttgttaggaatgatcaccactcc
catatatttccgaagagggcgaagtttgctgaagatggacacaacttcgtgcatcgaaga
cacggtattgacgcgagagatgcaaggaagcgggaccggtatggatacggcgcgaagaga
cgctcctatggagggaaaagcagagacgaccatgagagcacatcgcagcgatcttctccc
agtgcgcatagggagaaaccgcatggtccacgtaaacggctgaagaagtcgtcgtcgcca
ccgtctcacgaggacgggaaaaaacttcatcgaaacatcgacggcagcgatttggagaat
tctcccactcagggtcattgcgatggccgcttcaatcgtcggttcggcggatcaagtggc
ttgggagggtattctcctcgtcggcggaggtcagaagctgctgtgaagacgccgtctcca
ccgcctcggtcgccgatccgtctcaaaactagggcgtgggacatggtgcccgcggggatt
gatagcaaagtggtggcggccctggctgcagcacacacagcgcagcaacaacagcagcag
caggtgtcaatggctccgctggtgccgatgagcgtcatgaccgcgcctcacaaactaaac
gctgcggctgctgtggctgcagcagcagcagcggcgtcgcagtcgcatctgtcggcgatg
ctgccctcgcttctgctgcagcagcaacagcaggtgcagcagcaggtgaacggcgtcagc
ggcagcggcggcggcagcggtggaggggggctgtcgacggtgacgctgacgcaagcgacg
cggtcgatacggcggctgtacgtggggaatgtgccgtcgacggtgtcagacggcgagctg
atggagttcatgaacgcggccatgctgtccgccaacgcccaccacatccccggcaccaag
ccctgcatcaactgcatcgtgaatatagagaaggcatatgcatttgcagagttcataacc
ccggaggatgccacaactgctcttggttttgatggcgttaccctccatggcaccattcta
aaaatccgtcgccctaaagatttcattgcacctgagcatggaggttgtcctattgcacaa
ccagtcatcaatctagtaggagatgttgtcttagactctcctcacaaggtatttgtaggc
ggaatatcttctttattaacaccagataaggttaaagaaatcatcacagcctttgggcaa
ttaaagtcctttcattggaagaccatgcatcacaacaatggtggttgctctatagccttt
tttgagtatttagatccaacagtgacacatcaagcttgcaaaggtttgaatgggatgaac
ttaggaggacaagttttaactgtccttcaggccacaccagatgctaaatatgaggtgttt
tctaaaaatccaccattttatgatattccagaagaagcacttcctttattagaaacaccc
acaaatgttttggaaattcacaatttggtaagtgaggaagaagttcttcatatgcaagat
aaagatgtgaggaaattgatggaagatgttcggattgaatgtaaaagatttggtaacatc
agatcgatacaaattgtgaaaccctcaattccacaagtatgcaaaaccatagatcagaaa
gaagagaaaattctaatgggtacaaatggagagccttcaaataatgaagaagaatccaat
attcccaccatagcaattacaaatgaaacttgtgagttgaaggatatggagagaatccca
caatccattgccaacaattgtgggaatgatgttgaggattctactaataaagaaataaac
aacatggaagaaataaaactggaagatggatgcaaagatgtggattgcaataccaaagaa
gaaattgaaaaacaacccctgcttcaaatctctacttcaatttcatcaagcttaaatccc
aacaatttacttggaagcaatacatgcaaaatgagcagaatggagcccttgaaagcaggg
aacatttatgtagaatattcccgagatgagtcggcatgccacgcggctcatgcccttcat
ggccgggggtatgggaatgcaaaagtaagtgtggcatttgtgtctccgaggttctatttg
aagcactttgggcgagaaagtgcagcggtataa

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