Physcomitrium patens (spreading earthmoss): 112291823
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Entry
112291823 CDS
T01041
Name
(RefSeq) coatomer subunit beta'-1 isoform X1
KO
K17302
coatomer subunit beta'
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112291823
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112291823
Membrane trafficking [BR:
ppp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
112291823
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112291823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_HPS5
NBCH_WD40
WD40_RFWD3
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Clathrin
TPR_GEMI5
HEAT_GCN1
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
112291823
NCBI-ProteinID:
XP_073394902
LinkDB
All DBs
Position
14:complement(5340201..5349600)
Genome browser
AA seq
965 aa
AA seq
DB search
MLCDGILLCGVAVCSIGDRSPQPLRRPRSSTMPLRLAIKRKLAQRSERVKCVDLHPTEPW
ILSSLYTGSLHIWNYQNQSLVKSFEVTDLPVRSAKFIPRKQWVVACSDDMFIRVYNYNTM
DKVKQFEAHTDYIRCVIVHPTLPYVLSCSDDMLIKLWDWEKGWICTQIFEGHSHYVMQVT
FNPKDSNTFASASLDRTVKIWNLSSPEPNFTLEAHQKGVNCVEYFTGGDRPHLITGSDDQ
TAKVWDYQTKGCVQTLEGHSHNVSAACFHPELPIILTGSEDGTVRIWHATTYRLENTLNY
GLERVWTIGYIKGSKRVAIGYDEGTIMIKMGKEAPVASMDGSGKIIWAKHNEIQTVNVKA
VGADFEFADGERLPLAVKELGSCDLYPQSLKHNPNGRFVVVCGDGDFIIYTALAWRNRSF
GSALDFAWSTDGEYAVRESTSKIKIFGKTFQERKSIRSSFSAEGMYGGTLLGVRSNDSVS
FYDWAEGRVIRRIDVVVKNVFWSDSGDLVAIASESSFYILKYNRDVVAEHFDSGRPTDEQ
GVEDAFELLHEISERIRTGLWVGDCFIYNNSAWRLNYCVGGEVTTMFHLDRPMYLLGYLA
NLSRVYLIDKEFNVVSYTLLLNLIEYKTLVLRGDLERAEEVLPTIPKEHLNSVAKFLESR
GQVEDALAIATDLDYKFDMAIQLGKLDTAKDIAEESHSESKWKQLGELAMSAGQFEVAEE
CFGYAKDLSGFLLLYTALGDAQGLDKLAATAKEQGKINIAFLSHFLLRKIEDCVQLLIDS
NRIPEAAFMARTYLPSEVSNVVSLWRNDLKKINQRAAESLADPQDYPNLFPDWELACDAE
VKNKEQSANFLPASQYLSYINGELSDLTGEVEDLHLNKDSSMENGHYVEESGGLVGNQEQ
EVFHDSEYLKEYQHEDLNVDDGAGFVKADQYIEGEGELLEPHLVNNTHESAEEWSVEIEQ
PHLEE
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgctctgcgacgggatcttgctgtgcggcgttgcggtgtgcagtatcggagatcgttcg
cctcaaccactgcgtcgcccccgatcgagcaccatgcctcttcgcttagcgatcaagcgg
aaactcgcgcaaaggtctgagcgagttaagtgtgtggatcttcatccaacagagccatgg
atattatccagcttatataccggaagtcttcatatttggaactaccagaaccagagcctg
gtgaagtctttcgaggttaccgacctgccagtgcgatcagcgaagtttatcccccgtaag
cagtgggttgtggcttgctctgatgacatgttcatccgagtgtataactataacacgatg
gacaaagtgaaacagtttgaggcacacactgattacattcggtgtgtgatagtgcatccc
acgctaccttatgttctatcatgctcagatgatatgcttatcaagctctgggactgggaa
aaaggttggatttgcactcaaattttcgaagggcactctcattatgtcatgcaagtaacg
tttaatcccaaagacagcaacacctttgcaagtgcttctttggatcgaactgtgaagatt
tggaacttgagttctcccgaacccaattttaccctcgaggctcatcagaaaggtgtcaat
tgcgtggagtatttcaccggcggtgaccggccacatttgatcacaggatctgatgatcaa
acagccaaggtgtgggattaccaaaccaagggttgtgtgcagactttagagggccattct
cacaatgtatctgcagcgtgttttcatcccgagctccctatcatccttactggttcagaa
gatggaacagttcgtatttggcatgcaactacgtacaggctagagaacacgttgaactac
ggcttggagcgagtatggactattgggtacatcaagggctcaaaaagggtggcaattgga
tacgatgaaggaactatcatgattaaaatgggaaaggaggcaccagttgctagcatggat
ggtagtggtaaaatcatatgggcaaaacacaatgaaatacagactgtcaatgtcaaggca
gttggtgctgatttcgagtttgctgatggagaacgcttgcctctggctgtgaaagagcta
gggagttgcgatctgtatcctcagagcctcaaacataatcccaatggcaggttcgtggta
gtgtgtggtgatggtgacttcatcatctacacagctcttgcttggagaaatcgatcattt
ggttctgccttagattttgcctggtcaactgatggtgaatatgcagttcgcgaaagcact
tccaagatcaaaatctttggcaaaacttttcaggagcgaaaaagtattcggtcatctttt
tcagctgagggaatgtacggtggtactttgcttggagttcgttctaatgactcggtctct
ttctatgattgggctgaaggccgtgtaattcggagaattgatgtcgtagtgaagaacgta
ttctggtcagacagcggagatctggttgcgattgcgagtgaaagctccttctatattctg
aagtacaatcgggatgtggttgcagagcactttgacagtggcaggccaacggacgaacaa
ggtgtggaagacgccttcgaactcctacacgaaatctccgaacgaattagaactggcttg
tgggtgggcgactgcttcatttacaacaattcggcatggaggctcaactattgtgtcggt
ggagaggtgacgacaatgttccacttagatcgtccgatgtatctacttgggtatctcgca
aatctgagtcgcgtgtacctcatcgacaaggagttcaatgtcgtgagctacacacttttg
ctgaatctgatagagtacaaaactctagtcttgcgaggagatctggaaagagcagaggaa
gttttaccgactattccaaaggaacatctgaatagtgttgcgaaatttctggagtcacgg
ggtcaggtggaggatgctcttgctattgcaactgatcttgactacaagttcgatatggcc
attcagctaggcaagctagatactgctaaggatatagccgaagagtcacacagtgagtcc
aaatggaagcagctaggcgaacttgccatgtcagctggacagtttgaagttgcggaagaa
tgcttcggttacgcgaaggatttgagcggtttcttgctgctatatacagcccttggagat
gctcaagggcttgataaactggcagctactgccaaggagcaggggaagataaacattgcc
tttctcagccactttttactccgaaaaatagaggattgtgtacaattactgatagacagt
aatcggataccggaggctgcctttatggctcgtacatacttgccgagtgaagtgagcaat
gttgttagtctctggcgaaatgatttgaagaagataaatcaaagggctgctgagtcatta
gcagaccctcaagattatcccaatttatttccagattgggaattggcttgtgatgcggaa
gtcaagaacaaggagcagagcgccaactttcttccagcctcgcaatatctgagttacatc
aatggtgaactaagtgacttgactggtgaggtagaggacttacatttgaacaaagattct
tctatggaaaacggtcactacgtggaagagagcggaggactcgtaggtaaccaggaacaa
gaagttttccatgactcagagtatttgaaagagtatcaacatgaggatttaaatgtggat
gatggggctggttttgtgaaggccgaccagtacatagaaggtgaaggcgagcttttggag
cctcacctcgtaaacaacactcacgaaagcgctgaagaatggagtgtggaaatcgaacaa
ccacatcttgaagaatga
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