Physcomitrium patens (spreading earthmoss): 112291979
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Entry
112291979 CDS
T01041
Name
(RefSeq) WD-40 repeat-containing protein MSI4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03082
ATP-dependent chromatin remodeling
ppp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112291979
03083 Polycomb repressive complex
112291979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppp03036
]
112291979
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
112291979
Histone modification proteins
HAT complexes
HATB complex
112291979
HDAC complexes
Sin3A-HDAC complex
112291979
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
112291979
PRC2.2
112291979
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
112291979
Heterochromatin formation proteins
Other heterochromatin formation proteins
112291979
Chromatin remodeling factors
NuRD complex
112291979
NuRF complex
112291979
NuRF complex (fruit fly)
112291979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_LRRK2
eIF2A
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
112291979
NCBI-ProteinID:
XP_024395780
UniProt:
A0A2K1JDQ8
LinkDB
All DBs
Position
15:12705396..12711188
Genome browser
AA seq
458 aa
AA seq
DB search
MKKVPEDRYAQWKLLVPALYDWLTNHHLMWPSLSCRWGPQLEAGSSKTRQLLFYSERTDG
ECPNTIVVAQCDIMKPRTAAAEQISQFKEGGKSPHLKKLKTIIHPGEVNRIREIPQNSNI
LATHTDSPKVLIWNTKTQPNRATTSAASESKPDLVLIGHTDNAEFALNVSRTAPYVISGG
RDKCVLLWSIEDHITTMQEQTPKSITPTAAGSKQSGTAGGAADTTNVYTRGIFKGHTDTV
EDVQFRPSSMNEFCSVGDDSCLLLWDARTGYQPISKVVKAHNADLHCVDWNAHDENLILT
GSADNSVRLFDHRKILARGQAIPVEQFEGHSAAVLCVQWCPDRASVFGSCAEDGLLNVWD
YEKVGKALDTTNLKQPVKVPPGLFFQHTGHRDKVVDFHWDSRDPWTIVSVSEDANTPGGG
GTLQIWRMIDFIYRPEDEVLAELDEVRPQLVSQNTPAS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggttccggaggatcggtacgcgcaatggaagttgcttgtcccagctttgtat
gactggctgaccaatcatcaccttatgtggccctctctttcttgccggtgggggccgcag
ttggaggcagggtcctccaagactcgtcaacttcttttttactctgaaaggacggatgga
gagtgtccaaacaccatcgttgttgcccaatgtgacattatgaagccacgaactgctgca
gcggaacagatttcacagttcaaagaaggtggaaaatcacctcacctgaagaagctcaaa
actattattcatcctggtgaggttaacagaatacgagaaattcctcagaatagcaatatt
cttgccacgcatactgatagtcccaaggttctgatatggaataccaaaactcagccaaac
cgagctacaacatcagcagcgtctgaatcaaaacccgatctggttttgataggtcacact
gacaatgctgaattcgctttgaacgtaagtcgaactgctccttacgtcatatcaggaggc
agagataagtgtgttttgttatggagcatagaagaccatatcactactatgcaagagcag
actcctaaatcaatcacaccgacggcagcagggtccaagcaatcaggaactgcagggggt
gctgccgacactactaatgtgtataccagagggatttttaagggccatactgatactgtg
gaggatgtccaatttcgtccttcgagcatgaatgagttttgcagtgtaggcgatgattct
tgcctcctcttgtgggatgctcgcactggataccaaccaatatcgaaggttgtgaaggct
cacaatgcggacctccactgtgtcgattggaatgctcatgacgagaatcttattttaact
ggatcagcagataattctgtaaggttgtttgatcaccgaaagattttagctaggggtcaa
gctattcccgttgagcaatttgaagggcactccgctgctgtgctctgtgtccagtggtgc
ccagatagagcttctgtgtttgggagctgcgccgaggatggattgcttaatgtgtgggat
tatgaaaaggtcggtaaggcattagataccaccaatttgaaacaacctgtaaaagttcct
ccaggccttttcttccaacacacagggcacagggacaaagtggtggactttcattgggat
tcgcgcgatccgtggacaatagtcagtgtgtcggaggatgctaacacccccgggggtggg
ggcactttgcagatttggagaatgatagacttcatttacaggcctgaagacgaagttttg
gcagaacttgacgaagtgcgacctcaattggtgtctcaaaacacccctgccagttag
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