Physcomitrium patens (spreading earthmoss): 112292091
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Entry
112292091 CDS
T01041
Name
(RefSeq) THO complex subunit 7A
KO
K13176
THO complex subunit 7
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03013
Nucleocytoplasmic transport
ppp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112292091
09122 Translation
03013 Nucleocytoplasmic transport
112292091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112292091
03041 Spliceosome [BR:
ppp03041
]
112292091
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
112292091
Spliceosome [BR:
ppp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112292091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
CCDC39
DUF6468
DUF2730
OVT1
Erp_C
YlqD
ALMT
Motif
Other DBs
NCBI-GeneID:
112292091
NCBI-ProteinID:
XP_024396013
UniProt:
A9TN93
LinkDB
All DBs
Position
15:complement(14041160..14042728)
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AA seq
224 aa
AA seq
DB search
MAAHYAISPAEDDAVIRQRLLTRTTTTRGEPPLKKLIKKFTALAGEIDKEDSKYSECEKL
YKSFLQELATFELPLLKTKAVVDANRREQESFKELHVELNQQISQAQRDIEDLKIQLEEA
KIERQHKEECEKIRRQIAAQSPRLITQKQLNDLEKDLVQLEAESYAAARTIDLRKKQFGV
LLHVVDDLQTTLDEEQKNPVDFEAADLVSPADESSNAAEPMSIN
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcattacgctatcagcccggcggaggacgatgcggtgatcagacagcgtcta
ctgacgcgaacgacgaccacgcgcggagagcctcccttgaagaagctgattaaaaagttc
acggcgttggcaggggaaattgacaaggaggacagcaagtacagcgagtgtgaaaagctg
tacaagtcgtttcttcaggagttggctacttttgagcttcccttgttgaagaccaaggct
gtggttgatgctaatcgacgtgagcaggagagtttcaaggagttgcatgtcgagctcaat
cagcagatttctcaggcacaacgggatatcgaagacttgaaaatacaacttgaagaggcg
aagattgagaggcagcacaaggaggaatgtgagaaaattagaagacaaatagctgctcag
tcaccacgcttaatcacgcaaaagcaacttaacgatcttgagaaagatcttgtccagctg
gaagcagagagttatgcagctgctagaacaattgatcttcgcaagaagcagtttggtgta
cttttgcacgttgtggatgacttgcaaactactttagatgaggagcaaaaaaatccagtt
gattttgaagcagctgacctagtttcacctgcagacgagagctcaaatgcagctgagcca
atgtctatcaattaa
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integrated database retrieval system
