KEGG   Physcomitrium patens (spreading earthmoss): 112292170
Entry
112292170         CDS       T01041                                 
Name
(RefSeq) uncharacterized protein
  KO
K11790  denticleless
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ppp04121]
    112292170
Ubiquitin system [BR:ppp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     112292170
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_Gbeta WDR55 DSE1_N Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML EIF3I Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd ASA1 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_Aladin Beta-prop_IFT140_1st PAC11 Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_WDR41 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_SPT8 WDR90_beta-prop_4th DNAI3_WD CFAP251_N Beta-prop_WDR11_1st Beta-prop_Vps41 WD_LRWD1 WDR54 TRM82_WD Beta-prop_Nup120_160 Beta-prop_IFT122_2nd Pep3_Vps18
Other DBs
NCBI-GeneID: 112292170
NCBI-ProteinID: XP_024396155
UniProt: A0A2K1JE11
LinkDB
Position
15:complement(14170289..14175727)
AA seq 495 aa
MATRCQHDSLFHALSTRELRPCKVRGRPHMGRLCSEGGSSGSGVLSVEHDGVPAPPLAVS
YSKKRGDGHMLAVADEEGFVSIFNTRLQLPTFMATNYETDKIRLKSWMAHTNAIFDVSWI
QDDTRILTASGDQTVRLWDVESHKALGVMRGHSGSVKSLCAHPSNAEIFASGSRDGSIAL
WDLRTSTTISGTEVTHYRPVSCVTDTHLAPRSKNVRRRKGATYSVTGVLYQQDERILATS
GAADGVVKFWDTRKLKVPVVQTPSQHTRTSEGVGRVHGITSLSQDPTSSRLIASCTDSKI
YMYDGAFPERGVISSFSGHIVGSFYIKAAFSPDSAHILSGSTDGNVYIWQVDNPSNPAVL
EGHRGEVTAVDWCSSSCKIVTSSDDCMVRVWSLKEHEFTRHQLPSLFCHRLHCVSTSPSS
TSNDDVSVIPETPQPKQPKSLASTPTSVLDSLSELHPNLPHGSSPRAKRDIRQVLSPVFD
GRKRPRTIRDYFSHT
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggcgacccgttgtcagcatgactcactctttcacgctttgtcaacgcgggagttacgg
ccttgcaaagtgagagggaggccgcacatgggaaggctatgttcggaggggggctcttcg
ggatcaggtgtactttctgtggagcatgatggggttccagctccgcctctcgcagtatcc
tacagcaagaaaagaggagatggacatatgctcgcggtggcggatgaggagggctttgtc
agtatctttaacactcgtcttcaacttcctaccttcatggccactaactacgaaacagat
aagattaggttgaagtcatggatggcacacaccaatgccatatttgatgtctcctggata
caggatgacacgcgcattctgacagcgtcaggagaccagacggttcgtctctgggatgtc
gaatctcacaaggctttaggagtgatgaggggtcactccggaagcgtgaagtctctatgt
gcccatccatctaatgcagaaatttttgcatcagggtcaagggatgggagtatagctcta
tgggacctgcggacttcaacaactatttctggaaccgaagtaacccattacaggcccgtt
tcatgtgtcacagacacccaccttgccccaaggtcgaagaacgttcgtaggagaaagggc
gcgacttacagcgttaccggtgtcctgtatcaacaagacgagcgcatcctcgctacatct
ggtgcagctgacggtgttgttaaattttgggatacgagaaaactgaaggttcctgtggtg
caaacgccttcacagcacacacggacgtctgaaggggtgggccgtgtacacggcatcaca
agtctctctcaagacccaacaagttcacgcctcattgcctcatgcactgacagcaagatc
tacatgtatgatggtgcatttcccgagcggggcgtaatatcgagcttctcaggccatatt
gtaggatccttctatatcaaggctgcatttagtcctgatagtgcccatatccttagtggc
tctacagacggcaacgtgtacatatggcaggtggataatccttcgaatccggcggtatta
gaaggtcataggggagaagtaactgctgtcgactggtgctcttcaagttgcaaaatcgtc
acgagctctgatgactgcatggtacgggtttggagtctgaaagagcatgagttcacgcgc
caccagttgccatcgcttttctgtcatcgccttcattgtgtctccacttcaccttcatct
acctcgaacgatgacgttagtgtcatcccagagactccccaacctaagcagccgaagtcc
ctagccagcactccaacttctgtccttgatagtctttccgagctgcacccaaatttgcca
catgggagctctcctagagctaagagggatatacgccaagttttgagccctgttttcgat
gggaggaaacggcctcgcactatccgggattacttttcacacacctag

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