Physcomitrium patens (spreading earthmoss): 112292377
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Entry
112292377 CDS
T01041
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112292377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112292377
03016 Transfer RNA biogenesis [BR:
ppp03016
]
112292377
03012 Translation factors [BR:
ppp03012
]
112292377
04131 Membrane trafficking [BR:
ppp04131
]
112292377
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112292377
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112292377
Transfer RNA biogenesis [BR:
ppp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112292377
Translation factors [BR:
ppp03012
]
Eukaryotic type
Elongation factors
112292377
Membrane trafficking [BR:
ppp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
112292377
Exosome [BR:
ppp04147
]
Exosomal proteins
Proteins found in most exosomes
112292377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
FcpA
AAA_22
Gtr1_RagA
DUF34_NIF3
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
112292377
NCBI-ProteinID:
XP_024396549
UniProt:
A9SA04
LinkDB
All DBs
Position
1:17622013..17624171
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETVKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARFEEISKEVSAYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDNVSEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGIIRPGMLVCFAPTGLTTEVKSVEMHHESMPEAHPGDNVGFNV
KNVAVKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMTVETFAEYPPLGRFAVRDMRQT
VAVGVIKAVEKKEPTGAKVTKAAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaaggtccacatcaacatcgtggtcatcggccatgtcgactccggcaag
tcgacgaccactgggcaccttatctacaagttgggaggtatcgacaagcgtgtgatcgag
cgtttcgagaaggaggcggcggagatgaacaagcgttcgttcaagtacgcgtgggtgctg
gacaagctgaaggcagagcgcgagcgtggtatcacgatcgatatcgcgttgtggaagttc
gagaccgtgaagtactactgcactgttatcgacgcgcccggacatcgcgatttcatcaag
aacatgatcacgggaacgtcgcaggcggactgtgccgtgctgatcatcgactcgacgacg
ggagggttcgaggccggtatctcgaaggatgggcagacgcgtgaacacgcactgctggcg
ttcactttgggagtgaagcagatgatttgctgctgcaacaagatggacgcgacgaccccg
aagtacagcaaggcccgatttgaggagatcagcaaggaggtgtcggcgtacctgaagaag
gtggggtacaacccggacaagattccgttcgtgccgatctcagggttcgagggtgacaac
atgatcgagaggtcgacgaacctggactggtacaagggtccgactctgttggaggcgttg
gacaacgtgtcggagccgaagaggccatctgacaagcctctgaggctgccgcttcaggac
gtgtacaagattggaggcattggaactgtgccagtgggacgggtggagacgggaatcatc
aggccgggcatgttggtgtgcttcgcaccgacgggactgacgactgaggtgaagtctgtg
gagatgcaccacgagtcgatgcccgaggcacacccgggtgacaacgttgggttcaacgtg
aagaatgtggcggtgaaggacctgaagagagggtacgtggcctcagactcgaagaatgac
cctgcaaaggaggcagcaaactttacggcgcaggttatcatcatgaaccacccgggacag
atcggtaacggttatgcgccagtgctggattgccacacgtcgcacattgcggtgaagttt
gcggagatcttgacgaaggtggacaggcgatcgggtaaggagctggagaaggagccgaag
tttttgaagaacggagacgcagggttcgtgaagatgattccgacgaagccgatgacggtg
gagacgttcgcggagtacccaccattgggacggttcgcggtgcgggacatgaggcagacg
gtggctgtgggtgtcatcaaggctgtggagaagaaggagccaactggtgccaaggtgacc
aaggccgccgccaagaagaagtga
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