Physcomitrium patens (spreading earthmoss): 112292494
Help
Entry
112292494 CDS
T01041
Name
(RefSeq) uncharacterized protein
KO
K14306
nuclear pore complex protein Nup62
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112292494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112292494
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112292494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
APP_E2
COG3_N
FapA
DUF3450
Motif
Other DBs
NCBI-GeneID:
112292494
NCBI-ProteinID:
XP_024396807
UniProt:
A0A2K1JD76
LinkDB
All DBs
Position
15:9615989..9621868
Genome browser
AA seq
751 aa
AA seq
DB search
MSGFTGFGTSSQSTPTAFSFGTSSAPAFGSTAAGSTPAAGGSLFGGSSAPSFGFGASPAA
SSGGGFGSSTFGSTGLFGGASSSSSLFGASPTPAFGTPSSQAASAASPSPSPFAFAQSSA
TPSASSPAPSLFGASPSPFGSTNAQSSATPAASSSPFGASPSTGSAFSGFGGSFGSSGFG
FGATPSSAASAAATAQSSGASSGFGASSLFSGSKPATPAFGAMTPQFGASSSASTTPGFG
ASSSAFSLSQSTPAATPSASPPGFSFGNITSPAPSFGFGAQSTPATTPAVSSAAASTPFA
GFSFGSSAATSAASATPATSSAFGASTTTPSQPQASSSSLFGSSTFGSTTSSSSAPSTSS
SLFSMSTPSTPSFSLPASTSATSSSASASTLSFPSSITSAAAASTTPTASSGFGFGTSTP
ASSAGALFGSTPASTQASTPASSGGFSFAGAAPASSASGGFSLSLLAKTSAASTPAVSAT
TTPSTGFGMGTGLGWSNLSAGPAAATTPAATTTAATSTTTSTSTAATSTAGTSEALTSTP
ARTPKPPSEIVGKTVEEIIKEWTHELQERTSKFRKQAEALGEWDRRIIGNRNLLIKLESE
VATVVESQHSLERQLELIETHQQEVEKSLESMEEEAEKLYRDERPSLLEDEAAATRDMMF
EQAEFVERELERMGEQIKETIQNINAAQGGDLDIAEGASPLDLVVRILNNQLTSLLWIDE
KAGELSGRMQSFADQGALLDKGHRGSRLRGA
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcttcacaggattcggcacttcttcacagagtacgccaactgcgttctctttc
ggaacgtcttcagcgccagcatttggttctaccgcggcaggtagtactcctgcagcaggg
ggtagcctgtttggagggtcgagcgcgccctcgtttggttttggagcctcgcctgctgcg
tcttcgggcgggggttttggatcgtccacgtttggaagcactggcctgttcggtggagct
tcctcttcctcatccctctttggcgccagccccactcccgcctttggaactccaagttcg
caggctgcatctgcagcatcgccttctccatcacccttcgcatttgctcaatcctcagct
actcctagcgcaagctctccagctccctctctgttcggagcttccccctctcctttcgga
agcacaaatgctcaatcctctgctactcccgcagcctcttcgtctccgttcggagcttct
cccagcacagggtcagctttctcgggattcggaggctcgtttgggagctctggatttggg
tttggtgcgaccccatcttcagcagcgtcagcggcagcaactgcccagtcttcaggtgca
tcatcgggtttcggcgcaagttctctattctcaggcagcaagcctgctaccccagcgttt
ggcgcgatgactccccagttcggcgcttcttcaagcgcttccactactccaggttttggt
gcctcttcgtctgcattttctttatctcaatcaacccctgcagcgacaccttctgcctct
cctcctggattttcgttcgggaatattacgagccctgccccctcctttgggtttggcgct
caatcaacccccgctacaacccccgcagtgtcctcagcagcagcctcaactcctttcgct
ggattttcattcggttcgagtgcagcaacatcggctgcctcggcaactccggccactagc
tcggctttcggcgcatcaaccacgaccccaagccaaccccaagcttcttcttcctctctc
tttggcagctctacatttggatctacgacttcatcctcttccgcaccgtcgacgtcctcc
tctttgttcagtatgtctactccttccacaccttccttttcgctccctgccagcacctca
gccacatcctcctctgcttctgcatctactctaagctttccatcatctataacatcagca
gctgctgcaagtacaactcctaccgcttcaagcgggtttggtttcggaacttcgactcca
gcttcatcggcaggtgcactttttgggtctactccagcatcaacccaggcatctaccccg
gcctcctcgggaggtttctcttttgcgggggccgcacctgcgtctagtgcaagtggtgga
tttagcctcagtttgcttgccaagacgtctgcagcctctactcctgcagtttcagcaaca
actacccctagcactgggtttgggatgggaaccggtttgggatggtcaaatttgtcagct
ggtccagcagccgcaactactcctgcagcgaccacaacagcagccacctccacaaccact
tcgacctcaactgcagcaacctcaactgccggaacgtctgaagctctcaccagtacacct
gcacggacaccaaagcctccgtcagaaattgttggaaagactgtggaagagatcatcaaa
gagtggactcatgagcttcaagaacggacatcaaagttccgcaaacaggcagaagccttg
ggcgagtgggaccgacgaattattgggaatcggaacctgttgatcaagcttgagagtgaa
gttgctactgtagtggaatcacaacacagccttgaacgacaattggaacttattgagact
catcaacaggaggtggagaaatcactggaaagcatggaagaggaagctgaaaagctatat
agggatgagcgtcccagtttattggaagatgaagctgctgctactcgtgatatgatgttt
gagcaagctgagtttgtggagcgtgagcttgaaagaatgggcgagcagatcaaagaaacg
attcagaatattaatgccgcccagggcggagacttggatattgcagaaggagctagtcct
ttggatttggttgtccgcattttgaacaaccagttgacatcgctgctctggattgacgag
aaggctggagagctttcaggccgtatgcaatcttttgctgaccagggtgcacttcttgat
aaaggacacagaggatctcgtttgcgtggagcctaa
DBGET
integrated database retrieval system
