Physcomitrium patens (spreading earthmoss): 112292660
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Entry
112292660 CDS
T01041
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112292660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112292660
03016 Transfer RNA biogenesis [BR:
ppp03016
]
112292660
03012 Translation factors [BR:
ppp03012
]
112292660
04131 Membrane trafficking [BR:
ppp04131
]
112292660
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112292660
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112292660
Transfer RNA biogenesis [BR:
ppp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112292660
Translation factors [BR:
ppp03012
]
Eukaryotic type
Elongation factors
112292660
Membrane trafficking [BR:
ppp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
112292660
Exosome [BR:
ppp04147
]
Exosomal proteins
Proteins found in most exosomes
112292660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
AAA_22
DUF34_NIF3
Semialdhyde_dhC
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
112292660
NCBI-ProteinID:
XP_024397143
UniProt:
A9RGA5
LinkDB
All DBs
Position
2:complement(4045153..4047244)
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETVKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARFDEISKEVSAYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLEWYKGPTLLEALDNVSEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIRPGMLVCFAPTGLTTEVKSVEMHHESMPEAHPGDNVGFNV
KNVAVKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMTVETFAEYPPLGRFAVRDMRQT
VAVGVIKAVEKKEPTGAKVTKAAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagaaggtgcacatcaacatcgtggtgatcggtcatgtggactccgggaag
tcgacgacaacgggacacttgatctacaagctgggagggatcgacaagcgtgtgatcgag
cgtttcgagaaggaggcggcggagatgaacaagcggtcgttcaagtacgcgtgggtgctg
gacaagctgaaggcggagcgcgagcggggtatcacgatcgatatcgcgctgtggaagttc
gagacggtgaagtactactgcactgtgatcgacgcgcccgggcatcgcgatttcatcaag
aacatgattacgggaacgtcgcaggcggattgcgcggtgctgatcatcgactcgacgacg
ggaggtttcgaggccggtatctcgaaggatggtcagactcgggagcacgcgttgctggcg
ttcacgctgggagtgaagcagatgatctgctgctgcaacaagatggacgcgacgacgccg
aagtacagcaaggcccgatttgatgagatcagcaaggaggtgtcggcgtacctgaagaag
gtggggtacaacccggacaagattccgttcgtgccgatttcggggttcgagggtgacaac
atgatcgagcgatcgacgaacttggagtggtacaaggggccaaccctgctggaggcactg
gacaacgtgtcggagccgaagaggccatcggacaagccgctgcggttgccgctgcaggac
gtgtacaagattggaggtattggaactgtgccagtgggtcgtgtggagacaggggtgatc
aggccgggtatgttggtgtgcttcgcaccgactggactgacgacggaggtgaagtcggtg
gagatgcaccacgagtcgatgccggaggcgcacccgggtgacaacgtggggttcaacgtg
aagaatgtggcggtgaaggatctgaagagagggtatgtggcatcggattcgaagaacgac
cccgcaaaggaggcagccaacttcactgcccaggtgatcatcatgaaccacccgggacag
atcgggaacgggtacgcgccagtgctggactgccacacatcccacattgcggtgaagttt
gcggagatattgacgaaggtggacaggcgatcgggcaaggagctggagaaggagccgaag
tttttgaagaacggagacgcagggttcgtgaagatgattccgacgaagccgatgactgtg
gagacattcgctgagtacccaccactgggacgtttcgcggtgcgtgacatgaggcagacg
gtggcagtgggagtgatcaaggccgtggagaagaaggaaccaaccggtgccaaggtgacg
aaggccgctgcgaagaagaagtga
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