Physcomitrium patens (spreading earthmoss): 112292977
Help
Entry
112292977 CDS
T01041
Name
(RefSeq) nuclear pore complex protein NUP85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112292977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112292977
03036 Chromosome and associated proteins [BR:
ppp03036
]
112292977
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112292977
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112292977
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
112292977
NCBI-ProteinID:
XP_024397742
UniProt:
A0A2K1J711
LinkDB
All DBs
Position
16:4945506..4952427
Genome browser
AA seq
747 aa
AA seq
DB search
MQMPSFNGGDFVPYANSPVSAGGDGAPVVHTVHHSMASTPRVLVSWGPGNTLRLSYLPQV
VRDGDDDMKISSSREGDAANGQVVEVKLGKKDDQPLAEKRALAYSSAQAFALLQNQKQQM
LQSDGGSSRTGTFDWWQAVLEYSQIISATLGPASGPPGSATDFSGFPTKELQASTKPTTV
KAIWDLVEIFYVDKNGASWLPERLVEWLASYDAVLSSNTLHTKLTKLQQRLVNLRFPEEE
KEYWDGVASALAVGWLDIAVYLLRMHGSYQHDQIDNRNVENGLVETVAVLISKMPRLRPS
LPAGAPGQAFDFKPEFSKAWEKWRSQVAKLDGSTYWGECNNITTQKGLKKLLKVLLGSIE
DLLLSTTHWMELLVAHLLHVQPFSKVSEGLAGYAVKCVESKGDSGMNESTSANDPLQELT
LAILSDDTEVVVAECTRLFDPWLMAHLMELLTAKSKYAQSILREERYALGGISLEELNRL
SYAQVLCSHQLTWQLAPVYLSFCPRQGLGILETLLLKQPVSTSDRLALKVLEVCRLYDLG
TVATTVNRIVGVHHWKHGRKGAGIAWLQRAQDDRRLAAVADELLESVSLGMSGSQMETLQ
ELEGLVDLLGSELHSSQGLTFLHRYKDFKTGLQIIKKLRKQETDQQKIAEQGRQAADFLL
QLLKPQVTPQRFWLPLLRDAVELLEWPEMPLLGIHETNLLLSRLQELSLAKVRGDLEGID
PRDLSRQSLERIRLALACNLGRALLQE
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgccgtcctttaatggaggcgattttgtgccctacgcgaactcgccggtctca
gcggggggagacggtgcgccggtggtgcatacggtgcaccattctatggccagtacgcct
agggttctagtttcctgggggccgggaaacactctgcgcttatcatacctgccgcaggtc
gtaagagatggagatgacgacatgaaaatttctagctctcgggagggtgatgccgcgaat
ggtcaagtggtggaggtcaagctgggaaagaaggacgatcagccgcttgctgagaagcgg
gcccttgcttattcttctgctcaggcattcgcgttattgcagaatcagaagcagcaaatg
ctgcagagtgatggcggatcaagccgaacgggtacatttgattggtggcaagcggtgttg
gagtacagccaaatcatcagtgccacacttggacccgcttctggacctcctggctcagct
acagacttctctggcttccctacaaaggagctacaagcgagtaccaagccaacaactgtg
aaggccatttgggaccttgtggaaatattctatgttgataaaaatggtgcatcttggttg
ccagagcgtttggtggagtggctggctagctacgatgctgtgttatcaagtaataccttg
cataccaagctgacaaagctccagcagagactagtcaatttacggtttccagaagaggag
aaagagtactgggatggagtagcttctgcgcttgcagttggatggcttgatattgcggtt
tatctactccgaatgcatgggtcttatcagcatgaccaaattgacaaccgcaatgttgag
aatggtttagttgaaactgtggcagtattgatatcaaagatgcctcgtcttcgaccaagt
ttacccgcgggtgctcctggtcaagcttttgacttcaaacctgaatttagcaaggcatgg
gagaagtggcggagtcaagtggcgaaattggatggaagcacatattggggagaatgtaat
aatattactactcaaaagggtttaaagaagcttctaaaagtcttacttgggagtatagag
gacctactgctatctaccacccactggatggagctattagttgctcatttgcttcacgtt
cagccattttccaaggtgtccgagggtttagcaggttatgctgtgaagtgcgtggagtct
aagggagattcaggaatgaatgaatctacatctgcaaatgatcctcttcaggagctcacg
ctagcaattctaagtgatgacaccgaggtggttgttgctgagtgtactaggcttttcgat
ccttggttgatggcacacctgatggagttgttaacagcaaagagcaagtatgcccagtca
attttaagggaggagcggtatgccttgggtggcattagtttggaagaactcaaccgcttg
tcttatgctcaagttctttgttctcatcagcttacttggcagctcgcgccagtttaccta
tcattttgtccacggcagggtttgggcattctggagacactattgttgaaacagccagtt
tctaccagcgaccgtttggctctcaaagtcttggaggtgtgccgactgtatgaccttggg
acggtagctacaactgtaaataggattgttggggtgcatcattggaaacatggacgcaag
ggtgcgggcatagcctggttgcaacgggctcaagatgacagacgtcttgcagcagtggca
gatgaacttctggaatcagtatcactgggtatgagtggttctcaaatggaaactcttcag
gaacttgaaggcctcgttgacctacttggatctgagcttcattcatctcaggggctcact
ttcttacacaggtataaggatttcaagactggtcttcaaattataaaaaagttgcgtaaa
caggaaactgatcagcagaagatagctgaacaaggcagacaagcagctgatttcttgtta
cagttgctgaaacctcaagtcacaccccagagattctggctaccactgttgcgagatgcg
gttgagttgttggagtggccagagatgccgctattaggtattcatgaaacgaatcttttg
ttgagtaggttgcaagagctctcacttgccaaggtccgaggtgatctggagggaattgac
ccacgtgatctctcgcgccaatcgttagagaggatacggcttgccttggcatgcaactta
ggtcgggctttattgcaagagtga
DBGET
integrated database retrieval system
