Physcomitrium patens (spreading earthmoss): 112293042
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Entry
112293042 CDS
T01041
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppp03009
]
112293042
Enzymes [BR:
ppp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112293042
Ribosome biogenesis [BR:
ppp03009
]
Eukaryotic type
90S particles
Helicases
112293042
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
112293042
NCBI-ProteinID:
XP_024397836
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Position
16:complement(778544..781527)
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AA seq
482 aa
AA seq
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MESSNAPPLFSKRKPKAAVAAASNKKTAAPALLDEDAKAAKEITTFEGLGLTDWLVRACK
ELGMKRPTLVQQGCVPQILAGKDVFGLAQTGSGKTAAFALPILQKLAENPYGVFALVLTP
TRELAFQISDQFKALGSEVNLRSTVVVGGMDMTTQAKALMQRPHIVIATPGRLRDHFMND
PGIPDVFAKAKYLVLDEADRLMDVGFESELRSVFETMPSNRQTLLFSATMTSNLKALHDL
SLDKAFFYQQYEGFKTVEALQQQYILTPANVKDVYLMHIMSTLEERKIRSVIIFASSCRT
CHLLSLMMSELEVDTTALHSMKTQQQRLASLSRFKSGQVSILIATDVASRGLDIPTVDLV
INYDIPRFTRDYVHRVGRTARAGRGGSAVSLITQYDVQLVQDIEELLGKKLEEYELDEDK
VLKSITKVYKAKRVAMLKIVDSGFEDKVKTRKEQKVKTLVDKGLLDPKRLKDKKRKRPSS
TD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggagagttccaatgcgccaccgttgttctcgaaacggaaaccaaaggcagctgtcgcg
gcagccagcaacaagaagaccgctgccccggcgctgttggatgaagacgcgaaggcggcg
aaagaaattacgacgttcgaaggattagggttaacggactggctggtgcgagcatgcaag
gagcttggaatgaagcgccccaccttggtacaacaagggtgtgtgccgcagattcttgct
gggaaagatgtttttggtttagcgcagactggtagtggaaagactgccgcatttgcactt
ccgattctgcagaaattagccgagaatccgtatggtgtttttgcgctggtgttgacgcca
acgcgagagttggcatttcaaatttccgatcagtttaaggccttaggttctgaggtgaat
ttgcggagcacagtggtggttggggggatggatatgactacgcaagccaaagctcttatg
cagaggcctcatattgtcattgctactccaggccgtttgagggatcattttatgaatgat
cctggcattcccgacgtttttgcaaaagcgaagtatttggtcctcgatgaagccgatcgg
ctcatggatgttggcttcgaaagtgagctcagaagtgtctttgagaccatgcccagcaat
cgacaaaccttattattttctgctactatgacgagtaatctgaaagctttgcatgacctt
tcattggacaaagcttttttctatcaacaatacgagggctttaaaacagttgaggccctt
cagcagcagtacatcttaacacctgctaatgtgaaagatgtgtaccttatgcacattatg
tccacgctggaagagaggaaaatacgttcagttattatttttgcttccagctgcaggacg
tgtcatttacttagtttgatgatgtcagagctggaagtggatacaactgcattgcattcg
atgaagacacagcaacaaagacttgcatcactaagtagattcaagtcggggcaggtttct
atattgattgcaactgatgtggcaagtagaggcttggatattccaacagttgatttagta
attaattacgatattcccaggtttactagagactacgtacatcgagttggaaggacagct
cgtgctgggagaggagggagtgctgtgagcttgataactcagtacgatgtgcagctagtg
caagatatcgaagaacttttaggaaaaaaactagaggaatatgaattggacgaagacaag
gttttgaagtcaatcacaaaggtttacaaagccaaaagagttgctatgttgaagattgtg
gatagtgggtttgaagacaaagtgaagactcgaaaggaacagaaagtgaagactttggtg
gacaaaggtcttctggaccctaagaggttgaaggacaagaaaaggaagaggcctagtagt
actgattga
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