Physcomitrium patens (spreading earthmoss): 112293143
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Entry
112293143 CDS
T01041
Name
(RefSeq) clathrin heavy chain 2
KO
K04646
clathrin heavy chain
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04142
Lysosome
ppp04144
Endocytosis
ppp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112293143
04142 Lysosome
112293143
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
112293143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112293143
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112293143
Membrane trafficking [BR:
ppp04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
112293143
Exosome [BR:
ppp04147
]
Exosomal proteins
Proteins found in most exosomes
112293143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_H_link
Clathrin_propel
Clathrin-link
TPR_PEP5_VPS11
TPR_Vps41
TPR_COPA_B
IcmW
Motif
Other DBs
NCBI-GeneID:
112293143
NCBI-ProteinID:
XP_024398050
UniProt:
A9RFW2
LinkDB
All DBs
Position
2:complement(2077377..2087707)
Genome browser
AA seq
1712 aa
AA seq
DB search
MAAASAPITMKEALTLTSLGINQQFVTFTHVTMESDKYICVRETSPQNSVVIIDMSMPNQ
PLRRPITADSALMNPSSRVLALKALIPGSTQDHLQIFNIELKAKMKSYQMPEQVVFWKWI
TPRLLGLVTQTSVYHWTIEGESEPVKMFERTANLSGNQIINYRCDPSEKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQALEAHAASFASHQVAGNDSPSLLIAFTTKTISAGQLTS
KLHIIELGATSGRPGFSKKAADLFFPPDFADDFPVSMQISAKYGLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTADAPTVGGFYAVNRRGQVLLATVNEATIIPFVSNQLSNLEL
AVNLARRGNLPGAEGLVVQRFQELFSQMKYKEAADLAAESPQGILRTPDTVAKFQSVPVQ
PGQTSPLLQYFGTLLTKGKLNVFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDMALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRADPQ
GAVNFALMMSQLEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHALLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRVAQLCEKAGLYMRALQHYTELNDIKRVVINTHAI
EPQGLVEFFGTLSKEWALDCMKELLQVNMRGNLQIIVQVAKEYGEQLGVDACVKLFESFK
SFEGLYFFLGAYLSTSEEPEIHYKYIEAAAKTGQIKEVERVTRESNFYPAERTKNFLMES
KLPDARPLINVCDRHGFVPDLTHYLYVNNMLRYIEGYVQKVNPQNAPLVVGQLLDDDCPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDT
NNNPEHFLTTNPYYDSKVVGKYCEKRDPTLAVVAYKRGLCDDELVNVTNKNSLFKLQARY
VVERMEPDLWLKVLNPENSCRRQLIDQVVSTALPESKNPEQVSATVKAFMTADLPHELIE
LLEKIVLQNSAFSGNPNLQNLLILTAIKADTTRVMDYINRLDNFDGPAVGEIAVGAELFE
EAFAIFKKFNLNVQAVNVLLDNIRNIDRAVEFAARVEEDDVWSQVGKAQLREGLVSDAIE
SFIKANDASQYNEVIDVASGVRAYDDLVKYLNMVRKKVKEAKVDSELIFAYAKLNRLDDI
EEFIVTPNLANLQTVGDRLFDEELYEAAKIIFTHISNWARLASTLVKLHQFQAAVDAARK
ANSARTWKEVCFACVDAEEFRLAQICGLNVIVQVDDLEEVSEYYQNRGRFDELISLMESG
LGLERAHMGIFTELGTLYARYRPDKLMEHLKLFVTRINIPKLIRVCDEQQHWKELTYLYI
QYDEYDNAAATMMSHSPEAWEHMQFKDVAVKVANVELYYKAVYFYLEEYPELINDLLNVL
AARVDHTRVVDIMRKAGHLPLVKPYMVAVQSANNAAVNEALNNLYIEEEDYERLRESIDM
YDNFDQISMAQRIEKHELLEMRRVGAYIYKRAGRWKQSVALSKKDNLYKDAMETCSQSGD
RELAEELLTFFVDKGKKECFAACLYTCYDLIRADVAVELAWMHGMMDFAVPYLLQFLREY
SSKVDDLIKDKLEATEEKKSKEQQEKDVVAESNMYAQLLPLALPAPPVAGMPGLGGGMPV
PGMGGGMPMPGMPGMPGMPGMSGYGMPSMSAF
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgctagcgcgcccatcaccatgaaggaggctctcacgctgacgagcctcggg
attaaccagcaattcgtcacatttacacatgtgacgatggagtccgataaatacatttgc
gtgcgggagacgtcgccgcaaaacagtgtggtgatcattgacatgtcgatgcctaaccaa
cctctccgtcgccctatcaccgccgactccgccttgatgaatccttctagcagagtgctg
gccttgaaagccctgatacctggttcaacacaagatcatctccaaattttcaacatcgaa
ttgaaagccaagatgaaatcgtatcaaatgccagaacaggtagttttttggaagtggatt
acaccgaggttgctaggactcgtgacacaaacttcagtttatcactggactattgaaggt
gaatctgaacctgtaaagatgtttgagaggacagcaaatttgagtggcaaccagatcatc
aattatagatgcgacccgtcagagaagtggcttgtgctgattggtatagctcctggagca
cctgagcggccccaacttgtgaaaggaaacatgcagttgttttcagtggaccagcagagg
agtcaggcgcttgaagctcatgctgcgtcatttgcttcccaccaggtggctggaaacgat
tctccatctctactgattgctttcacaacaaaaactatctcagctgggcagctaacatcc
aagctgcatattattgagctgggtgctacgtcaggtagacctggtttctccaagaaggca
gcagatctattttttcctccagattttgccgatgactttcccgtttcgatgcagatctct
gccaagtacggccttatttatgtaattacgaagctcggtcttctttttgtatacgacctg
gaaacggcaacagctgtttatagaaaccgaattagtccagaccctatttttttgactgcc
gatgctcccacagttggtgggttttatgctgtaaatcgccgaggccaagtcctccttgct
acagtgaatgaggcaacaatcattccttttgtcagtaaccagctaagcaacttggagctt
gcagtgaatcttgcgagacgaggaaatctgcctggagcggagggactggttgtacaacgt
tttcaagaattgttctcccagatgaagtacaaggaggcagcagatcttgctgcagagtcg
cctcagggcattcttcgaactcctgatacagttgccaagtttcagagtgttccagtgcag
cctggacaaacttcaccactcttgcagtactttgggactttattgacaaaggggaagttg
aacgtgttcgaatctctggagctttcgcgactagtggttaaccagaacaagaagaatctg
ctggaaaactggttggcagaggacaagctggaatgcagtgaagagctgggtgatcttgtc
aagactgtggacaatgatatggcactcaagatatacattaaggctagggctacaccaaag
gtagttgcggcctttgcagagcgtcgtgaatttgacaagattttgatctactccaagcag
gttgggtacactccagattacctatttctgctgcagacaatcctacgagctgaccctcaa
ggtgctgtgaactttgctctgatgatgtctcaacttgaaggtggctgcccagttgactac
aacaccatcactgacttatttcttcagcgcaacatgattagggaggctactgctttcctc
ctggacgttttgaagccaaatcttccagagcatgccttacttcagactaaggttctagaa
attaatctggtcacattccctaacgtggctgacgcaattttggcgaatggtatgttcagt
cattatgaccgtcctcgtgttgcccaattgtgtgagaaagctggtctctacatgcgcgcc
cttcagcattacacggagctaaatgatatcaagcgcgttgttattaacacccatgccatt
gagccacagggtcttgttgagttttttggcacgctttccaaagaatgggccttggactgc
atgaaagagttgctccaggtgaatatgcgtggaaatctgcaaattatagtccaggtggcc
aaggaatacggtgagcagctgggtgtcgacgcgtgtgtgaagttgtttgagagtttcaag
tcatttgagggcttatactttttcctcggagcgtacttgagtacgagcgaggagcctgaa
attcactacaagtacattgaggctgcggcaaagactggccaaattaaagaagtagagcgt
gttacgagggagtccaatttctaccctgcagagagaaccaagaatttcctgatggagtcc
aagctcccagatgcaaggcctcttatcaatgtttgcgaccgtcatggttttgtgccagat
cttactcattacctgtatgtcaataacatgcttcgttatattgaaggttacgtacagaag
gttaaccctcaaaatgcacctttagtggtcgggcaattgttggatgatgactgtcccgag
gacttcattaaaggtttgattctttctgtccgctctctacttccggtggaaccattggtt
gacgagtgcgaaaagaggaaccgtctgaggttgctgacacagtttctggagcaccttgtg
agcgaagggagtcaagatgtgcatgttcataatgctttggggaaaatcattattgacaca
aacaataatcctgagcacttcctcaccacaaatccctattatgattccaaagttgttggc
aagtactgcgagaagcgcgatccaacgcttgctgtggttgcatacaaacgtggcctgtgt
gacgatgaacttgtcaatgtcaccaacaagaattctctctttaagcttcaggccagatat
gtggtggagcgcatggagcccgacctgtggttgaaggtcttaaatcctgagaattcttgt
aggaggcagctcattgatcaggtggtatctactgctcttccagagagcaagaatccagag
caggtgtcggccactgtcaaagctttcatgactgcagatttgccacatgagctgattgag
cttctggagaagatcgttcttcagaattcagctttcagtggcaaccccaaccttcagaat
ctgctcattcttactgctatcaaggccgatacgactcgggtcatggactacattaaccgt
ttggataacttcgatggtcctgccgtgggtgagattgcagtgggtgcggaactttttgag
gaagcgtttgcaattttcaaaaagttcaacctcaacgtccaagcagtgaatgttctcttg
gacaacattcgcaacatagatcgtgctgtcgagtttgctgctcgtgttgaagaggacgat
gtttggagccaggttggtaaggcgcagttgagggaaggattggttagcgatgccattgag
tctttcatcaaggcaaacgatgcctctcagtacaatgaagttatcgatgttgcatctggt
gtaagagcatatgacgacttagtgaagtacttgaacatggtacgcaagaaagtaaaggag
gcgaaggtagactccgagttaatttttgcttacgctaagctcaatcgtctcgacgacatt
gaggagttcattgttactcctaatcttgcaaatcttcaaactgttggagaccgcttgttt
gatgaagaactgtatgaggccgccaaaatcatttttacccacatttccaactgggcaagg
cttgccagtacccttgtcaaactgcaccagttccaagcagccgtggatgcagccaggaag
gccaacagtgcacggacgtggaaggaagtctgctttgcttgtgtggatgccgaagagttt
cgtctggctcaaatttgtggtctcaatgttattgtccaggttgatgatctggaagaggtc
agcgaatattaccagaacaggggtcgctttgacgagctcatttcacttatggaaagtggg
cttggtttggagcgtgcccacatgggcatcttcacagagttgggcactttgtatgccaga
taccgtccagataagctcatggagcatctcaagctattcgtcactcgtatcaatattccg
aaacttattcgtgtgtgcgatgagcagcagcactggaaggagcttacttacttgtacatt
caatatgatgagtacgataatgctgctgcaaccatgatgagtcattctccagaagcttgg
gaacacatgcagttcaaggatgttgccgttaaggttgcaaatgtagaactttactataag
gctgtgtacttttacctcgaggaatatcccgagctcatcaacgacttactcaatgtgttg
gctgcacgtgttgaccacacacgggttgtggatatcatgcgaaaggccgggcatcttcct
ttggtgaagccatacatggtagcagtacagagtgccaataacgctgcagtcaatgaggct
ctgaacaacttgtacattgaggaggaagattatgagcgattgagagagtccatcgatatg
tatgataacttcgatcagatttcaatggctcagaggattgagaagcacgagctcctggaa
atgcgccgtgttggagcgtacatctacaagagagctggtagatggaaacaatctgttgcc
ctgtccaagaaggacaatttatacaaggatgccatggagacttgctcacagtcaggggat
cgtgaacttgctgaggagcttctcacgttcttcgtggacaagggcaagaaggaatgcttt
gctgcttgtttgtacacttgttacgacctcattcgtgccgatgttgcggttgagttggca
tggatgcatggcatgatggacttcgctgtaccatacctgttgcagttcttgcgtgaatat
tcttcgaaggtggatgatttgattaaagacaaattggaagccactgaggagaagaagtct
aaagagcagcaggaaaaggacgtagttgctgagtcgaacatgtacgctcagctcttgcct
ctggctctaccagctccccctgttgccggtatgcctggtttgggtggaggtatgcctgtg
ccgggtatgggtggaggtatgccaatgccaggaatgccgggcatgccaggtatgccgggt
atgtcaggctacggcatgccctcaatgagcgctttttaa
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