KEGG   Physcomitrium patens (spreading earthmoss): 112293249
Entry
112293249         CDS       T01041                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03020  RNA polymerase
ppp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112293249
  09124 Replication and repair
   03420 Nucleotide excision repair
    112293249
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppp03021]
    112293249
   03400 DNA repair and recombination proteins [BR:ppp03400]
    112293249
Transcription machinery [BR:ppp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     112293249
  RNA polymerase III system
   RNA polymerase III
     112293249
  RNA polymerase I system
   RNA polymerase I
     112293249
DNA repair and recombination proteins [BR:ppp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      112293249
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 112293249
NCBI-ProteinID: XP_024398236
LinkDB
Position
16:10438396..10440737
AA seq 145 aa
MADEDYNDYDGGDVGYEEEPPEPDIEDEVAEGDEENDDARDFDGLETDTLVDGAEVRTDK
PRKTTKYMTKYERARVLGTRALQISMNAPVMVNLEGETDPLEIAMKELRERKIPFTIRRY
LPDGSYEDWGVDELIVEDSWRRQVG
NT seq 438 nt   +upstreamnt  +downstreamnt
atggctgacgaagattataatgattacgacggtggtgatgttgggtatgaggaagagccg
ccggagcctgatattgaggatgaggttgcggaaggagacgaggagaatgacgatgctcgg
gatttcgacgggctggaaactgatactttggtggacggcgctgaagttcgaaccgacaaa
cctcggaaaaccacaaagtacatgaccaaatatgaacgagctagagtgcttggtactcgt
gctcttcaaatcagtatgaatgccccagtgatggtgaatctagaaggcgagacggatcct
cttgagatcgctatgaaagaacttcgggagcggaaaattcccttcaccattcgtcgctat
ctgcccgatgggagttatgaagattggggcgtggacgagttgatcgtagaagattcttgg
aggcgccaggtcggctga

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