Physcomitrium patens (spreading earthmoss): 112293322
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Entry
112293322 CDS
T01041
Name
(RefSeq) crossover junction endonuclease MUS81 isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03440
Homologous recombination
ppp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112293322
03460 Fanconi anemia pathway
112293322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112293322
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
112293322
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
DUF6429
HTH_45
EarA
CobN-Mg_chel
Motif
Other DBs
NCBI-GeneID:
112293322
NCBI-ProteinID:
XP_024398365
UniProt:
A0A2K1J898
LinkDB
All DBs
Position
16:complement(3004784..3009773)
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AA seq
658 aa
AA seq
DB search
MDTAIVQCPANEALAAFLVEKREEWFLKQRSDNLDSVFIGAHKSVCESTVPLHSLRAASK
VKGIGKWLLKILAEFFNVDEDEADDEDEEQPSGSQRAKKATRRYLPKKSSAPYAILITLY
RAHMLGKEFMMRQELIDAAEASGLASMPIESNKGTLPPRFGGGPHYSYSGWSSMKTLLEK
GLVVKKSNPAKYMLTEEGHKTAEECQGRAGLGPADHTRPPVSDEIPPVNARPAPGRAEKA
TTTRPRASKSKSNGAVGKASTLDVNKLKAMGYGEQDIQLALNEATSTDGLQDSDVWGFVL
GILSRGGKEKTAAAIGPVSQPAVQPFVERGTMPTNSSWYHSAPVVTVEAAVPSTSTAPSG
RLSTSAQTMDVHQTGYNEVAVPPLEVGQGFGQVYEVFLVLDSREQFRRDARGGAALQKFA
DRIGVQFQVQVETRQLPVGDALWIARHKVLRHEYVLDFIVERKRVEDLWASIKDNRYKQQ
KLRLQRCGIKRLVYLIEGDPNLTDASESLKTATFTTEILEGFDVQRTRDTSETVQKYGQL
TTAIIDRYSLEVGKPGRHPGGYCMRYVEFVNFCKDVEMERVTDVFGVQLMQVRNVTEDMA
LSILERYPTLHSLALAYTELEGDVQAQEQLLKDIPIRNKNKTISANISKNIYKLVWAP
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggatactgcgattgtgcaatgtcctgccaatgaagccctggctgctttcttggttgag
aagcgcgaggagtggtttttgaagcagcgcagtgacaatctcgattccgtatttattgga
gcgcacaaaagtgtctgcgaatccactgtgccgctgcatagcttgcgagcagctagcaaa
gtgaaaggaattggcaaatggttgttgaagattctcgcggagttcttcaatgtcgacgag
gatgaggctgacgacgaggacgaagagcaacctagtggatcacaaagagcaaagaaggct
acacgtagatatctgcctaaaaagagctcggctccttatgctattttaatcaccttgtac
agagctcacatgttaggcaaagagttcatgatgcggcaagagctaattgatgcagctgaa
gcaagtggcctggcttctatgcctatcgagtcaaataaggggacgttacccccgaggttt
ggaggtggacctcactattcctactccgggtggagctccatgaagaccctattagagaaa
ggcttggtggtaaagaagagcaatccggccaaatacatgctcacggaggagggccacaaa
actgcagaggaatgccaaggcagagcagggttgggtcctgcggatcatacccggcctcca
gtttcagacgaaattcctccagtcaatgccagaccagctcctggaagggcagaaaaggcc
accaccactcgaccccgcgcatcgaaatccaaatcaaatggtgcagtaggaaaagcatct
actcttgatgttaataaacttaaagcaatgggatatggtgaacaagatattcaactagct
ctgaacgaagcgacatccacagatggtctacaagacagtgatgtttggggatttgtattg
ggcatcctatccagaggagggaaagaaaaaactgcagcagcaattggacccgtctcacag
cctgccgtacaaccttttgtggagagagggaccatgccaacaaacagctcttggtatcac
tcagctccagtagtcaccgtggaagcggctgtgccttctacaagcacagctccttcaggc
cgtttaagcacaagtgcacagaccatggatgtgcatcagacaggatacaatgaagtggct
gttcctcctttagaggtcggtcaaggcttcggacaggtatacgaagtgttccttgttttg
gactcgcgagagcaatttcgccgcgatgcaagagggggtgcagcactacagaagtttgct
gatcgaatcggcgtgcaattccaagttcaagtcgagacaaggcagttgccggttggggat
gcactttggattgcaagacacaaggtcttgaggcatgagtacgtgcttgattttatagtg
gaaagaaagcgcgttgaggacctttgggcatctattaaggacaatcggtacaagcagcag
aaattacggcttcagagatgtggaataaagagacttgtttacttgattgaaggagatcca
aacttgactgatgcatcagagagtttgaagacagcgacgttcacaaccgagatcttagaa
gggtttgacgtgcagcgaactcgtgacacaagtgagacagttcagaagtacggtcagctg
actactgcaataattgatcggtattccttagaagtcgggaaacctggccgacaccctgga
ggttattgtatgcgatatgtggagttcgtgaatttctgcaaggatgtagaaatggaacgt
gtcactgatgtgttcggcgtccagttgatgcaggtgcggaatgttactgaagacatggca
ctatcgatcctggagagatatccgactttacattctttagcccttgcttacacagaactt
gagggtgatgttcaagcgcaagaacaactgttaaaggacataccaatacgcaacaagaat
aagaccatcagtgctaatatcagcaaaaatatttacaagcttgtgtgggctccgtag
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