Physcomitrium patens (spreading earthmoss): 112293635
Help
Entry
112293635 CDS
T01041
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112293635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112293635
03110 Chaperones and folding catalysts [BR:
ppp03110
]
112293635
03029 Mitochondrial biogenesis [BR:
ppp03029
]
112293635
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112293635
Enzymes [BR:
ppp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
112293635
Messenger RNA biogenesis [BR:
ppp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
112293635
Chaperones and folding catalysts [BR:
ppp03110
]
Heat shock proteins
HSP60 / Chaperonin
112293635
Mitochondrial biogenesis [BR:
ppp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
112293635
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112293635
Exosomal proteins of other body fluids (saliva and urine)
112293635
Exosomal proteins of breast cancer cells
112293635
Exosomal proteins of colorectal cancer cells
112293635
Exosomal proteins of bladder cancer cells
112293635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
112293635
NCBI-ProteinID:
XP_024399062
LinkDB
All DBs
Position
16:complement(4166066..4170381)
Genome browser
AA seq
605 aa
AA seq
DB search
MAAASMAIAGSAATASLRVSSESRAPSSLSSSSAIGRVGFSGGLNQRRQRVAHRTTVKAA
KELHFNKDGSAIKKMQAGVDKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVE
LEDPVENIGAKLVRQASAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGID
RTVIALVKELKNMSKEVEDSELADVAAVSAGNNPEIGQMIAEAMGKVGRKGVVTMEEGRS
AENHLYVVEGMQFDRGYISPYFVTDPEKMSVEYDNCRLLLVDKKITTARDMIGILEETIR
GGFPLLIIAEDIEQEALSTLVVNKLRGSLKVAALKAPGFGERKSQYLDDIAILTSGTVIR
DEIGLALDKVGTEVLGTAAKVVLTKDSTTIVGDGSTQDAVEKRVAQIRNLIEIAEQEYEK
EKLNERIAKLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRL
ASKVDAIKESLDNDEQKVGADIVKRALCYPLKLIAKNAGVNGSVVVEKVLANENSSFGYN
AATGVYEDLMAAGIIDPAKVVRCCLEHAASVAKIFLTSDVVVTEIKEPEPVQAGNPMDAS
GASLI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcttccatggctatagccgggtctgctgcgactgcttctctcagggtgagc
tctgagagccgggcaccttcctccttgagttcttcctctgccattggccgcgtgggattt
agtggcggtttgaaccagcggaggcagcgggttgcgcaccgtacgacggttaaggctgcg
aaggagctgcacttcaataaggatggctctgctatcaagaagatgcaggctggagttgat
aagctcgcggatcttgtgggtgtcaccttgggccctaagggtcgcaacgtcgtgcttgag
agcaagtacgggtctcctaagattgtgaatgacggagtcaccgtagccaaggaggtcgag
ctcgaagacccagtggagaatattggagccaagttggtgaggcaggcatctgcgaagacc
aacgatttggctggagatggcaccactacctccgtggtgcttgcacaaggactcattgcc
gagggtgtcaaggttgtcgcagcaggagccaacccagttcaaattaccaggggcattgac
agaactgttattgccttggtgaaggagctgaagaacatgtcaaaggaggtagaagacagc
gaattggctgacgttgctgctgttagtgccggcaacaaccctgaaattgggcagatgatt
gccgaggctatgggcaaggtgggacgcaagggtgtggttaccatggaggaagggagaagt
gctgagaaccacttgtacgtggtagagggtatgcagttcgacaggggctacatttccccc
tacttcgtgacagaccccgagaagatgtctgtggagtacgacaactgcaggctcctcttg
gtcgacaagaagatcaccactgctcgtgatatgattgggattttggaggaaaccatccgc
ggtgggttcccactcttgatcatagctgaggatattgagcaggaagccctgtctacactg
gtggtcaacaagttgagaggctcacttaaggttgctgctttgaaggcacctggtttcggt
gagaggaagagccagtacctggatgatattgccatcctcaccagtggaaccgtgatccgg
gatgagattggtctggcccttgacaaagttggtactgaagtgttgggtactgccgccaag
gttgtccttaccaaggattcaaccacgattgttggagatggcagtactcaagatgcagtt
gagaagcgtgtggcccaaatccgcaacctcatcgaaatcgccgagcaagaatatgaaaag
gagaagttgaatgagagaattgctaagttgtctggaggtgtggccatcattcaggtggga
gctcaaactgagacagaattgaaggagaagaagctccgtgttgaggatgcgctgaacgct
accaaagccgccgtggaggaaggtatcgttgtgggtggaggatgcactttgttgagactg
gccagcaaagtggatgctatcaaggaatctttagacaacgacgagcaaaaggttggtgca
gacatcgtgaaacgggctttgtgctaccctctgaagcttattgccaagaatgccggcgtg
aacgggagtgtggtggttgagaaggttctagccaatgaaaactcatccttcggttataat
gctgctactggtgtgtacgaggatctcatggccgctggtatcatcgaccctgcaaaggtt
gtgaggtgttgcctggagcacgctgcctcggtcgccaagattttcttgacctctgatgtt
gtagttactgaaattaaggaaccagagcctgttcaagctggcaaccccatggatgcatca
ggtgcgtccctgatataa
DBGET
integrated database retrieval system
