KEGG   Physcomitrium patens (spreading earthmoss): 112293687
Entry
112293687         CDS       T01041                                 
Name
(RefSeq) small ribosomal subunit protein RACK1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03010  Ribosome
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    112293687
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppp03019]
    112293687
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppp04147]
    112293687
Messenger RNA biogenesis [BR:ppp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     112293687
Exosome [BR:ppp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   112293687
  Exosomal proteins of colorectal cancer cells
   112293687
  Exosomal proteins of bladder cancer cells
   112293687
SSDB
Motif
Pfam: WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 WD40_Gbeta WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd DSE1_N Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_EML TRM82_WD Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_Aladin ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_WDR41 Beta-prop_VPS8 ASA1 Beta-prop_NOL10_N Beta-prop_DCAF12 PAC11 CFAP251_N Beta-prop_NWD2_C Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_ACSF4 Beta-prop_DCAF4 PROPPIN Beta-prop_WDR75_2nd Beta-prop_pof12 Beta-prop_Vps41 Cytochrom_D1 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_2nd Tricorn_2nd Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 112293687
NCBI-ProteinID: XP_024399161
UniProt: A9RL45
LinkDB
Position
16:complement(2647294..2648577)
AA seq 316 aa
MAETLVLRGTLKGHANWVTAIACPLDNPDLILSSSRDKSIIVWHLSREEGNYGVARRRLT
GHAHFVQDVVISSDGQFALSGSWDGTLRLWDLNTGTTTRRFIGHTKDVLSVAFSVDNRQI
VSGSRDKTIKLWNTLGECKYTIQDVDAHTGWVSCVRFSPVTANPIIVSGGWDKVVKVWNL
TNCKIRTNLVGHTGYVNTVTVSPDGSLCASGGKDGVAMLWDLAEGKRLYSLDAGDIIHSL
CFSPNRYWLCAATQTCIKIWDLESKSVVDELRPEFTFVSKKAQIPYCVSLNWSADGSTLF
SGYTDGHIRVWAVGRA
NT seq 951 nt   +upstreamnt  +downstreamnt
atggcagaaactttggtacttcgcgggacgttgaagggtcacgccaattgggtgacggcc
atcgcctgcccgctcgacaaccccgacctcatcctttcgtcgtctcgtgacaagagtatc
atcgtctggcacctctctcgcgaggagggcaactacggtgtcgcccgccgccgtttgact
ggccacgctcacttcgttcaagatgtcgtgatttcctctgacggacagtttgctttgtct
ggatcatgggacggaaccctccgcttgtgggacttgaacaccggaaccaccacccggcgg
ttcattggccacaccaaggatgtgctcagtgtggctttctctgttgataacaggcagatt
gtgtctggctcccgtgacaaaactatcaagttgtggaacactctcggtgagtgcaagtat
accatccaggacgtagacgcccacactggctgggtcagttgtgtgcgtttctcccctgtg
acggccaaccctattatcgtgtctggagggtgggacaaggtcgtgaaggtgtggaacctg
accaactgcaagattcgtactaacttggttggacacaccggatacgttaatactgttact
gtgtctcctgatggttccttgtgcgctagcggtggcaaggacggagttgccatgttgtgg
gacttggccgagggcaagaggttgtactctttggatgctggcgacatcatccactcccta
tgtttcagccccaacaggtactggctgtgtgctgccactcagacctgtatcaagatctgg
gacttggagagcaagagcgtcgtcgacgagctgcgccccgagttcaccttcgtcagcaag
aaggcccagattccctactgtgtgagtctgaactggagtgccgacggcagcaccctgttc
agcggctacaccgatggtcacattagagtgtgggctgttggacgggcttag

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