Physcomitrium patens (spreading earthmoss): 112294069
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Entry
112294069 CDS
T01041
Name
(RefSeq) 15-cis-zeta-carotene isomerase, chloroplastic-like isoform X1
KO
K15744
zeta-carotene isomerase [EC:
5.2.1.12
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00906
Carotenoid biosynthesis
ppp01100
Metabolic pathways
ppp01110
Biosynthesis of secondary metabolites
Module
ppp_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
112294069
Enzymes [BR:
ppp01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.12 zeta-carotene isomerase
112294069
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Gene cluster
GFIT
Motif
Pfam:
NnrU
PEMT
ICMT
Motif
Other DBs
NCBI-GeneID:
112294069
NCBI-ProteinID:
XP_024399965
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Position
17:5743861..5747294
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AA seq
399 aa
AA seq
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MAQSAAVSSALFCGRVGVTQAQWLCLSRSLPSSGAFGKHAPRLDVLSKKLRISSGENLLR
PAYQGWVWSTKAHDSKDNVSTSPVRSSQTPSFPPPDLTTSEGLVGEDAAAFDVSSQKTSS
WLLFTAILGVVLAILYVAWIDPETGYGGAYIDSISALSDSHERTGKPAWSRRKIDRRKGL
SCTVCRIVSPSCGICYVEGGCLDRTKSTPTVYLVKITLVYFINHRYDGVQLWDFRSVFGV
REMVWAMSFISFFFLYPSTFNLLEVAAVDKPKVHMWETGIMRITRHPQMVGQFLWCFAHT
LWIGNSFTVTTSVGLLAHHLFGVWHGDKRQSERHGEAYNTLKERTSVFPFAAILDGRQKL
PPDYYKEFLRVPYFVIAGLTLGAYWSQPFLQRASQHLRW
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaatctgctgcggtttcgtctgctttgttttgtgggagagtgggtgtcactcaa
gctcaatggctttgtctttctcgatctttgccttcttcgggtgcgtttggaaagcacgcg
cctcgcttggatgttttgagcaagaaactgcgaatttcgagtggtgagaacctcctgaga
ccagcatatcaaggatgggtatggagcaccaaggcacacgatagcaaagacaacgtctct
acctctcccgttcgatcgtcacagacaccgtctttccctcctcctgatcttacaacgtct
gaaggcctagttggggaggatgctgctgcatttgacgtctccagccaaaagacctcctcc
tggttgctctttacagcaattctgggagtagtccttgcgattctttacgtggcttggatt
gaccctgaaacaggctacgggggtgcatatattgattcaatttctgcactcagcgacagt
catgagcggactggcaagcctgcgtggagcaggagaaaaattgatcggcgaaagggctta
tcgtgtactgtatgccgcatcgtctctccctcttgcggtatctgctatgtggagggtggg
tgtttagacagaaccaagtcaactccaacagtgtatctagtgaagattaccttggtttac
tttataaaccacagatacgacggcgtgcagctttgggattttcgcagcgtctttggtgtg
cgtgaaatggtttgggcaatgtcgttcatctctttcttctttttatacccttccacgttt
aatttgcttgaggttgctgctgttgataagcccaaggtacacatgtgggagactggtata
atgcggatcacccgacatccacagatggtgggacagtttctgtggtgttttgcgcacaca
ctttggataggaaactccttcacagtgactacttcagttggcttacttgcgcatcacctc
tttggagtctggcacggggataaacgtcaatcagaacgacacggagaggcttacaatact
ctgaaagagcggaccagtgtcttcccttttgctgctatactagatggtcgtcagaagctg
ccacctgattattacaaggagtttctcagagttccctactttgtaattgctgggttgact
cttggggcttattggtcccagccatttttacaaagagcaagccaacatctgaggtggtga
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