Physcomitrium patens (spreading earthmoss): 112294102
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Entry
112294102 CDS
T01041
Name
(RefSeq) uncharacterized protein isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112294102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112294102
Membrane trafficking [BR:
ppp04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
112294102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
TPR_Vps41
TPR_VPS8_2
WD40_CDC20-Fz
Clathrin
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_WDHD1_1st
WD40
Beta-prop_EML
WDR55
Beta-prop_THOC3
Beta-prop_HPS5
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
112294102
NCBI-ProteinID:
XP_024400031
UniProt:
A0A2K1J2J2
LinkDB
All DBs
Position
17:2133395..2144585
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AA seq
2020 aa
AA seq
DB search
MESNGLKKPLAQSPAKASVVADGSRVPVHWPDGFDFGFANSPEMPIQPLLLPHPLPRPRP
STQLPSLPRSRQSPQPLTLPLLRPGAAFAAAASRQVTRKTSISSHRDSHIDQEERSRQQS
EFSEGKIIHVSPSVVTEQKADDTNGLLKDSANATPGPEDFALARSVPEHENLVRVVDDAS
IVPKFRIRVIDEPGVVGEIESLITDEPDAAGKPENLPTVSNEPAVVERIESLITDGPEIA
EKPDNLPRVFDEPRVVEKIESIVTDGPEVAEKLENLRVFDEPEVVGDPGISFPNNVADTS
SNVIYRHEDHSYASSEISTEEELSDSDTGLISTNDNFNSDDTDEAVDALETNLEQKDDQI
EETRQSPTAFQLAEELEMRNSSSGLHWKEGAAAQPMRLDGIEKCKPAIDLLQLTTYGTLS
HALASPQLRREYGFPQAVTVHANFIAVGLSKGAVLVTPSKYSATRSADELESQKAFFLGG
GIETKEPVSSLCFSHQGDLLLVGYANGTLRLWDVSRRSMSKMMSTEHSEAIVHTLFLGQE
APGARNLRVISGDCKGRLLLHAFSQQMVPLIRRFSVETQCLLEGDKTGPVLSVSPLLPDE
GLHVSNGVNSSHQSRISSPPTLGSVMGGMGSVMGGMVGSVGAIDVGRKFLYDGGATSTTS
ATSADDGPRPMFVLVTHHTVLVVRLAADMQVRQPALEVMSKLSRPAGIRDGAIAYTAWRR
IRAKLGTSLVSSSGNSDSNVSNGSTATAFVTDRADAKKDEGDAANDVVDDDDLPMLAMGW
DTKMFIWQLTQSKLRKVREWELDSPAVGLAWLEEQMLVIVTAKDQLCLFTKEGIEVERGS
IRGDQEGMGALIYHSHIMNALGNPEKAYHSSLSVRGAALYLMGPQQLWRARLLPWRERIK
ALEDAGDWMGAFHIAMELYDGRARGVTGLPRGLDAMREAIMSTLLALLSAYIDMAFAYLS
VAYGSATLPALNSSSETASQAADRQGSGGLGQDLQDAREQYARVGGVAIEFCVHIGKQDV
LFENVFSKFVAVGQRGIFLELLEPYILKDMLGGLAPEVMQALVEHYSYHGWVDRVEQCVL
HMDIGSLDFNQVVRLCREHGLYSALIYLFNRGLDDFRSPLEELLIVADQASNSSQTQLVG
YKLLVYLKYCFIGLAFPPGHGSLPTTRLPGLRAEILQFLLDQEGSIRGRPLTGFKSEEVK
IYPRLWFLLQVDIQATLLVLRLAFPEHGPLGIGKQGFAYLTSADDEDLVLSASEDIHDGV
RYVQATVNALVEILNVSHKVRAFPKGVDTDVKDSQMIRPSNEGVGYLLDFVAQFVASRHA
VVSSATFMMILEYLALPTHGRGDALANEDLMVRLLNAVPDSNLDPSRTLELAQTNNFWQV
SGLLHTRGRNYEAALDDYLNDENQIGQPFLYIMDMLDPQKGLQESDLSKFKKAVLLRISE
LVQRSSKGTLGVVLKHMSSDNQQVIERLDHRPELLFAYLKGIMNARSGSNISGELDSAGV
LSHCKHQRRLPSRQHSTSSRFKRGNCCPQWDPNVDIKDLLQQSAIVFTDDMAELYVELLC
KFEPHAVLKFLESYENYRLEHCLKLCQEYGITDAAIFLLERVGDVASALDLVLKDVEICR
DRLELFVSTSSRTSVQAFDKDQQSVVEVGAVKAAVAAAVALCQRNTQRLEPRESITLWFR
LLDSIVEPSKVASNAVNTSFEVDRNFRNQEYLDSERIQIRGKSRAQRKLAIKQAKGKFLK
KVLVLLMGDIIDGMMGYIPLHVIMEKILADHGSHPFQDFRPTILNMLSAYGYERTILRTA
KHLTEEDTFYNIYALRRGCAHGYAALSSICCICGLGLEDDTLQGHTRSTAENSHGESTKG
VMAVATTSRSSNAFSIYFCGHAAHILCVVDDGSHKEDPSLPGCPVCSLKVKSSSSPYHAN
NAIWKGRDEASRSSTTPTPDRVAPYLLDTAIKSYHPATEIPRLAVLKQLQQGKQLSDLGP
SLQLRLAPPPKIRSRRASVPENGGALRNRHAPKSLINLRR
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgaatggactgaagaagcccctcgcacaatcgcccgcaaaggcctctgttgtg
gccgatgggagtagggttcctgttcattggcctgatggatttgactttggttttgcaaat
tcccctgagatgccgattcagccattgctgctgccgcatccattgccacggccccgtcca
tcgacgcagctgccttcattgccacggtcgcgtcaatcgccgcagccgcttacattgcca
ttgctgcgtccaggagcagcttttgcagctgctgcgtcccgacaggttacgcgaaagacc
tccatttcatctcatagagattcccacattgaccaggaggagaggtctagacagcaatcg
gagtttagtgagggaaagatcatacatgttagtccatccgtcgttacggagcaaaaagcg
gatgatactaatgggcttttaaaggattcggcgaatgcaaccccagggcctgaagatttt
gcattagctcgcagtgttccagaacatgaaaatctagttagggttgttgatgatgctagt
attgtgccaaaatttaggattcgtgtcattgatgagccaggagttgtgggagaaattgaa
agtcttattacggatgagccagatgctgcaggaaaacctgaaaaccttcctacggtttct
aatgagccagcagttgtggaaagaattgaaagtcttattacagatgggccagagattgcg
gaaaaacctgacaaccttccgagagtttttgacgagccaagggttgtggaaaaaattgaa
agtattgttacagatggaccagaggttgcagaaaaacttgaaaaccttagggtttttgat
gagccagaggttgtaggtgatccaggtatttcttttcccaacaatgtcgctgacacttct
tcaaatgtcatctatcgtcacgaagatcacagctacgctagctccgagatttccaccgag
gaggagctgagtgattcggatacgggcttgataagcacgaatgacaattttaactcagat
gacacagatgaagctgtagatgctttagaaacaaacttggaacaaaaagacgaccaaatt
gaggagacaaggcaatcacctacagcgtttcagttggccgaagaattagagatgcgcaac
tcctcctcgggtttacattggaaggaaggtgcagctgctcaaccaatgaggttggatggc
atcgagaaatgtaagcctgcaattgatcttttgcaactaactacctatggcactctctct
catgcattagcctcacctcaactgaggagggagtatggttttccacaagccgtgaccgtt
catgcaaattttatcgctgtcggattgtccaaaggagctgttcttgtcactcctagcaag
tattcagccacgcgcagtgccgatgagttggaatctcaaaaggcttttttcttgggaggg
ggtattgaaactaaagaacctgttagttctctttgtttcagccatcaaggggatctcttg
ctagtcggctatgcgaatggaaccctacgattgtgggatgtttctagaagatcaatgtcc
aaaatgatgagtactgagcactcggaggctattgttcatactttgttcttaggacaggag
gccccaggtgctcgcaatctaagagtaattagtggggactgtaaagggagacttctgttg
catgctttttctcaacagatggttcctttgattcgccgcttttctgtagaaacacagtgt
ctcctcgagggcgacaagactggtcctgttttatctgtttcacctttgttgcctgacgaa
ggtctgcatgtctcgaatggagtaaactcctctcatcaaagccgaatctccagtcctccg
acgttgggaagtgtaatgggcggtatgggtagtgtaatgggtggaatggtgggtagtgtt
ggtgcaatagatgttggtcggaagttcctctatgatggaggagctacttcaacaacctca
gcaacttcagctgatgatgggccaagaccgatgtttgtcttggtcacgcaccacactgtg
cttgtggtgcgccttgctgccgacatgcaggtacgccaaccagctttagaagttatgtca
aagttgagtagaccagctggaatcagggatggtgctattgcgtatacagcatggagacgc
attcgtgctaagcttgggacttcccttgtttctagtagtggaaactcagactccaacgta
tcgaatgggagcacagcgaccgcatttgtcactgaccgtgctgatgcgaagaaggatgaa
ggtgacgccgctaacgatgtcgtggatgatgacgacttaccaatgttagccatgggttgg
gacacgaagatgttcatttggcaattaacacagtcaaagctaaggaaagtgagagaatgg
gaactcgatagtcctgctgttgggctagcttggctggaggagcagatgctggtcattgtg
acagctaaggaccaactctgcttgtttacgaaggagggtattgaagtggagcgtgggtct
atacggggagatcaagaagggatgggggctcttatctaccacagtcatattatgaatgct
cttggtaatccagagaaagcttaccatagctcactatctgtccgcggagctgctctgtat
ctgatgggtccgcagcagctatggcgtgctcgtttgctgccttggcgggagcgcattaaa
gcattagaagatgctggcgattggatgggtgcattccacattgcaatggagttgtatgat
gggcgagccagaggggtaaccgggcttccaagaggattagatgcaatgcgggaggctatt
atgagtacattactggcgcttctttctgcttacatagacatggcttttgcgtacttgtcg
gtagcatatgggtcagctacgttacctgctctgaattcttcctcagagacagcttctcaa
gctgctgatcgacaagggtcagggggcttgggccaagatttgcaggatgcccgagaacaa
tatgcaagagttggtggtgtggccattgagttttgtgtacacattggtaaacaggacgtc
ttgtttgaaaatgtcttcagcaagtttgtggctgttggacaaagaggtatatttttggag
ctccttgagccatatatccttaaggacatgctaggtggtcttgctcctgaggtcatgcaa
gcactcgttgaacactacagttaccatgggtgggtggacagagtggagcaatgtgtgctg
catatggatattggatctttagattttaatcaggtggtgagattatgtagagagcatggt
ttatacagtgcacttatttatctgttcaataggggcttggatgacttcaggtctccattg
gaggaacttttgatagttgcagatcaggcctccaactcctctcagactcaacttgtcggg
tataagctgttggtgtacttgaagtactgcttcattggtcttgcctttccacctggccat
ggctctcttccaaccacgcgtttgccagggttacgagctgaaattttacaatttctactt
gatcaagaaggttccatcagaggaagacctttgacgggtttcaagtctgaagaggtcaag
atataccctcgactatggtttctgcttcaggttgacatacaggcaacccttctagtcttg
aggctggcctttcctgaacatggccccttaggtattggcaagcagggttttgcttatctt
accagtgctgatgatgaagatttagttctttcagcttctgaagatatccatgatggagtg
aggtatgtacaagcgactgtaaatgctttagttgagattctaaatgtgtctcataaagtc
agagcatttccaaagggagttgatacagatgttaaagactctcaaatgattcggccttca
aatgaaggtgttggatatctgctggactttgtggcacaatttgtggcgtctagacatgct
gtagtatcaagtgcaacgttcatgatgatattagagtatttagcactacctactcatgga
agaggagatgcactcgccaatgaagatttgatggtgaggcttctgaatgctgttcctgat
tcaaatttggatccgtctcgtactctcgaactagcgcaaaccaacaacttctggcaggta
agtgggttgcttcatacacgtggtcgcaactatgaagcagcactggatgactacttgaat
gatgagaatcagattggacaaccatttttgtatatcatggatatgcttgatccccagaaa
ggtttacaagaatccgacttaagtaaatttaagaaagctgttctcttgcgcatatcagaa
cttgtacaacgtagtagcaaaggcacattaggagtcgttttgaagcatatgagcagcgac
aaccagcaagtcattgagaggcttgatcatcgtccggagctcctgtttgcctatctgaag
ggcattatgaatgctcgttcaggaagtaatatttctggtgaattggatagtgccggtgtg
ctgtcacattgtaaacatcagcggcgcttgccctctcgtcagcactctacatcgagcagg
ttcaaacgagggaactgctgtccgcagtgggatccgaacgtggacatcaaagacttgttg
caacaatctgccatagtttttacagacgatatggcagaactttatgtggagctgttatgc
aaattcgaaccacacgctgtacttaaatttttggaaagctacgaaaactatcggttggaa
cactgcctcaaattatgtcaggagtatggtattacagatgcagcaatcttcttattggag
cgtgtaggtgatgttgcaagtgcactggatcttgtgcttaaggatgtggaaatatgtaga
gatcgcttggaactttttgtctccacctcatcaagaacctctgtgcaggcttttgacaag
gatcagcagagtgttgtagaggtaggagcggtcaaagcagcagttgccgctgctgtggcc
ttgtgtcagcggaacactcaacggctcgaacctcgggagtcaattacgctctggtttcga
cttcttgacagcattgtggagccatccaaagtcgcatcaaatgctgtgaatactagtttt
gaagttgacagaaattttagaaatcaagaatatttagattctgaaagaatacaaatacga
ggaaaatcaagagctcagcgaaagctagccataaaacaggcaaaaggcaagtttttaaaa
aaagtcctagtgttgctgatgggagatatcatagatggtatgatgggttacattccactg
catgttataatggagaaaatactagcagatcatgggagccacccattccaagactttcgt
ccaacaatattgaatatgcttagtgcgtatggctatgagcggacaatactgaggactgca
aagcaccttacagaagaggacactttctacaacatctatgcccttcggcgaggctgtgcc
catgggtatgcagctttgtcttccatctgctgcatttgtggacttgggttggaagacgac
actctgcaaggtcatacaagaagtactgcggagaattcacatggtgaatctaccaaaggg
gtgatggcagtagcgactacttcacgtagctcaaatgcattcagtatttacttctgtgga
cacgctgcacacattctttgcgtagttgatgatgggtctcataaagaagaccctagtctt
ccaggatgtccagtttgttcgctaaaggtgaaatcaagcagttcaccgtatcatgcaaat
aatgctatctggaaaggaagagatgaagcaagtagaagttccacaactccaactcccgac
agagttgctccatatttgctagacacagcaattaagagctatcaccctgctactgagatc
cctcggttggctgtgctgaagcagctccaacagggaaagcaactgtcagatttgggacct
tcactacaactccgcctggcaccgcctccaaaaattcgttctcgtagggcctcagttcct
gagaacggtggtgcattacgaaacaggcatgctccgaaaagcctgattaatctgcggaga
tga
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