Physcomitrium patens (spreading earthmoss): 112294159
Help
Entry
112294159 CDS
T01041
Name
(RefSeq) uncharacterized protein
KO
K09422
transcription factor MYB, plant
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppp03000
]
112294159
Transcription factors [BR:
ppp03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
112294159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
112294159
NCBI-ProteinID:
XP_024400128
LinkDB
All DBs
Position
17:complement(5789574..5795245)
Genome browser
AA seq
558 aa
AA seq
DB search
MGRHSCCHKQKLKKGLWSPEEDEKLVRFITKHGHGCWSAVPKQAGLQRCGKSCRLRWINY
LRPDLKRGVFSAAEENLIIDLHAVLGNRWSQIATQLPGRTDNEIKNFWNSCIKKKLRNIG
IDPNTHKLVGPESSNLLGESSSSEINPPSESNRSPSSNQQLIPNNSLGCVRFTNNEFKAQ
SLFHPPASHNPFNPMEDVLYNPTRGLNHIQSHGDSQFLDFNRVQSMQGNGLSTDNLLERL
MMGGKHSGGLPPKVPSMQHATESLDHDSNGPNPEHQHSTMVPPTFNPVFWLLHSSGSSSS
EPIQSTGKPFPGHNQHSAPEIEMRLGPFAPSSSSAPHDFHGESFQRFVQDRGDLSSITAN
LQLRSGSGSAHDDAMNVDHTNVRRPYRWQGQNGSEPSSSSTSNDTGISHPCSHLVFQEPS
GNHLWSNADSTSGPTILKPGHLPGQDAISDTTSTRPRFSSDQGPDHDTVMKWNDLLPTPE
NNPRQNHNINNLSRSQGSHPHTQNNGPSSHAQFSTSQQPLHCMTWQMQASHGGHDAMFDS
MAPMSQELQRMAAVLDQI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgggccgccactcgtgttgtcacaaacaaaaactgaagaaagggctgtggtcaccagaa
gaagatgagaagctggtgcgtttcataaccaagcacggccatggctgttggagtgccgtc
cccaaacaagctggtctccaaaggtgcgggaagagctgcaggttgcggtggatcaactac
ctccggccggatttgaaacgaggcgtattttcggcagcagaggagaacttgatcattgac
ttgcatgctgttcttggtaacaggtggtcacagattgcaacccagctaccaggccgcacg
gacaacgaaataaaaaacttctggaactcttgcatcaagaagaagctgcgtaacatcggc
atcgaccccaacactcacaagctcgtgggcccggagtcatcaaatctactcggtgaaagc
tcttccagtgagatcaatcccccaagcgaatccaacagatcaccctcttccaaccagcaa
ctcatccccaacaactccctgggatgcgtcagatttacaaacaacgagttcaaagcgcag
tcgttgttccatcctccagcttcccacaacccgtttaaccctatggaagatgtgctatac
aatccaaccagaggtctcaaccatattcagtctcatggagacagtcaatttttggacttt
aaccgcgtgcagagtatgcagggcaatggattgtcaaccgacaaccttctggagcgactg
atgatgggggggaagcacagcggggggctgcctccaaaggtgccatccatgcaacatgcg
actgaaagcctcgaccatgattccaatggaccgaaccctgagcaccagcactccaccatg
gttccaccaactttcaaccctgtcttctggctgctacactcaagcggttcttcctcctct
gaaccgattcaaagcacaggtaaaccattccctggccataatcagcattcagctccagag
atagagatgcggttaggtccctttgcgccgagctcgtcgtccgctccccacgacttccac
ggcgagagcttccagaggtttgtacaggaccgaggggacttgagctccatcactgcgaat
ctgcagctgcgatcgggttcaggatcagctcatgacgacgccatgaatgtggaccatact
aatgtccgaagaccgtaccggtggcaggggcaaaatggtagcgagccgagcagtagcagc
accagtaacgatacggggatcagccacccctgcagccatctcgtgttccaggagcctagt
ggcaaccatctctggtccaacgctgattccacttcgggaccaaccattctcaaacctggt
caccttccaggtcaagacgccatcagcgatacaacatccactagaccccggttctcatca
gaccagggaccggaccacgacaccgtcatgaaatggaacgacttgctgccgacgcccgag
aacaaccctcgtcagaatcacaacatcaacaatctgagccggtcccaggggagccacccc
cacacgcaaaacaacggaccatcatctcatgctcagttcagcacctcgcagcagccactg
cactgcatgacctggcagatgcaagccagtcacggaggccatgatgccatgttcgattcc
atggcacccatgtctcaggagctccagcgcatggccgctgttctcgaccagatttga
DBGET
integrated database retrieval system
