Physcomitrium patens (spreading earthmoss): 112294250
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Entry
112294250 CDS
T01041
Name
(RefSeq) novel plant SNARE 12-like isoform X1
KO
K08494
novel plant SNARE
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112294250
Membrane trafficking [BR:
ppp04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
112294250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
MCPsignal
YkyA
HBM
ISG65-75
Synaptobrevin
COG6_N
Motif
Other DBs
NCBI-GeneID:
112294250
NCBI-ProteinID:
XP_024400299
LinkDB
All DBs
Position
17:complement(7242948..7246367)
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AA seq
259 aa
AA seq
DB search
MASELPPQLVNIEKEVCDAFKLLSTGFQRLDKIKDAGRQTKQLEELTAKMREAKRLIKEF
DREINEGSDRVLPETAKLLNEKKQSLIKELNSYVALRKTYTSSIGSRQELLDGGLHAGAA
RGAHVRVASTMSNQELVEAGRKQMDETDQTIERSKQVVEDTINIGVQSATTLKGQTEQLG
RINNEMDTLQFSLKKASGLVKEIGRQMATDRCIMFFLFLVVAGIIAVVVVKVVNSSNKHG
QAPELPPPAARRRLLLTRI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggaattgcctccccagctggtgaacatagagaaagaagtgtgcgatgccttt
aagctcctctcgactggttttcaacgattagacaagatcaaagatgcaggaaggcagacc
aagcagcttgaggagctgactgctaagatgcgtgaggccaagaggttgattaaggagttt
gatagagaaatcaacgaggggagtgacagggtacttcctgagacagccaagctactgaac
gagaagaagcaatcgctcatcaaggaactcaattcttacgttgctctgagaaagacttac
acaagctcgatagggagcaggcaagagcttcttgatggaggtttgcatgctggagcagcg
cgtggcgcgcatgtccgcgtggcctcaactatgtcgaaccaagagctcgttgaagctgga
aggaagcagatggacgaaacagatcaaacgattgaaaggtcaaaacaggttgtggaggac
accatcaacattggcgtacaatctgccacgactttgaaaggacaaacggagcaactcggc
aggataaacaatgagatggatacactccaattctctctaaagaaagcttcaggtctagtc
aaagaaattggtcgacagatggcaacagaccgatgtattatgttctttctgttcctcgtt
gttgcgggtataatcgcagtcgttgttgttaaggttgttaattccagcaacaaacatggc
caagctccagaattaccacctccagctgccaggcggcggttactgttaactaggatttga
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