Physcomitrium patens (spreading earthmoss): 112294368
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Entry
112294368 CDS
T01041
Name
(RefSeq) uncharacterized protein
KO
K08331
autophagy-related protein 13
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112294368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112294368
03029 Mitochondrial biogenesis [BR:
ppp03029
]
112294368
Membrane trafficking [BR:
ppp04131
]
Autophagy
Autophagosome formation proteins
ULK complex
112294368
Atg1 complex
112294368
Mitochondrial biogenesis [BR:
ppp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
112294368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
112294368
NCBI-ProteinID:
XP_024400470
UniProt:
A9SJD6
LinkDB
All DBs
Position
2:7281765..7285613
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AA seq
685 aa
AA seq
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MPMSMQPNFTGTLVASSRAGSGHSLLVACPQGGGGGTGGAAASDRQAEFEGGACGGIVGG
RSREWVGCREDWWGSVFGGAFAMASLGSSQTEKAEMDSMVSECCAKALRVILGARIPHRQ
KQGVRRGTGRDGYDCMYMVGEGWGGGSTRKETAKLFNLEVESSDHVQKSVDACIRGVCHE
PMVVDIFFHEPTEAMEVPSSSSCGNESSNRRRRSDEWSESPQRVPNLRGESWSDGSDGAI
FSPAREVSLTLLERWVVSYDQTKQPFAEGDSPVDEDFSSLGQKRGLSPSAAPAHNVLEFP
VVYKRVVIMLRSLYCLARTLPAFRLFNPPNSVSHSPRFSLSYMVSHAPPALSEQDRSGMT
NCNLTPIETQWGRLCIAAMYKNVIAVSALQVTPQFVPEIIPNYLDSPTTQPLRRIDRVGS
FPESRGRSDGRGTCVAPSSGSAPNSPTSVLGRLYSWSGGIRKIFLEKQVAELSQSGIKRF
VYRPSEFLQGGFRTSSKVSIHNHEDPEECPFAIDDGKAGDYRSRVGSPGVRSKIPDSPDF
QGNTPGSDAGALVRILSRAPPLRQQWTQPVLTDLPVSRAGLTPYHPVAKSTGIVKNSPPK
PNSVAIRNSIRGRPGEIRRATSLGDNAGSGLSFGTGKVTFPPSIEFTLIKLRTASDVLKE
LKEYQDIRDFLVRQSEEFRACTRSL
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgagcatgcaacccaatttcacgggcactcttgttgcttcttcacgcgccgga
tcaggccacagtctccttgtcgcttgcccacaaggtggtggtggtgggactggtggtgct
gctgcgagtgatcgacaggcggaattcgaaggcggtgcttgcggtggaattgtaggagga
aggtcacgggaatgggttggttgtagagaggattggtggggatcagtgtttggtggagcc
ttcgcaatggcttcgctcggttcctcgcagacggagaaggcagagatggattccatggtg
tcggaatgttgtgccaaggcgttgcgtgtaattctcggggcgaggatacctcatcggcag
aaacagggcgtgaggcgcggaaccggcagagatgggtatgactgtatgtacatggtcgga
gagggatggggtggaggaagcacacggaaggagaccgctaagctgttcaacttggaggta
gagagctccgaccatgtgcagaagagtgtggatgcgtgcattcggggtgtgtgtcacgag
cccatggtggtggacatcttttttcacgagccgacggaggctatggaggtgccgtcgtcg
tcatcttgtggtaacgagagttcaaaccgacggcgcaggtctgatgagtggagtgaatcg
ccgcagcgggtgcctaatttgaggggggaatcgtggagtgatggtagtgatggcgccatc
ttttcgcccgcgagggaggtgtcgctgaccttgcttgaaaggtgggttgtgagctatgat
cagacgaagcagccgtttgctgaaggggattctcccgtggatgaggatttttcaagctta
ggtcaaaaacgaggattatcaccctctgctgctccggcgcataatgttctggagttccct
gttgtgtataagagggtagtgattatgttacgctctttatattgtttggcgcgcactttg
cccgccttcaggctgttcaatcccccaaattctgtgtcacacagcccgcggttctccctc
tcatacatggtctctcatgcacctccagcgctctcggaacaggatagaagcgggatgaca
aattgcaatttaaccccaattgagacgcagtggggcagattgtgcatcgccgccatgtac
aagaatgtaattgctgtttcagccctgcaagttacccctcaatttgtaccggagataatc
cccaattatctcgacagcccgacaactcaacccttgcgaagaattgacagagtaggatcg
tttccagaatctaggggacgttctgatggacgggggacatgtgttgctccttcatcaggt
tcagcgccaaattctccaacctcggtacttggacgactctacagttggagtgggggcata
cgcaagatcttcttagaaaaacaggttgctgagctatctcagtcaggcattaagcgcttt
gtgtaccgtccttcagagttcttacaaggtggctttagaacctccagcaaggtttctatc
cacaatcatgaggaccctgaggagtgtccatttgcaatcgacgacggtaaagcaggagac
tatcgaagcagggttggaagtccaggtgtgaggtcaaagattcctgattcgcctgacttc
cagggaaacaccccagggtctgatgctggggcattagtcaggattttgtctagagcacct
ccactacgccagcaatggacacaacccgtcttaacagaccttcctgtgtcaagagctgga
cttactccataccatcctgttgcgaaatccactgggatagtcaagaatagtccacccaag
cccaactctgttgctatacgcaacagcatcagggggcgacctggcgaaattcgccgagct
actagtctaggagacaatgcaggatcaggattgtcgtttggcaccggaaaggtcaccttt
ccaccatcaatagaattcacactcatcaaattgagaaccgcatccgacgttttgaaagaa
ctaaaggagtaccaagatatacgtgactttttggttcgtcaaagcgaggaattcagggcc
tgtactcgaagtttatga
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