Physcomitrium patens (spreading earthmoss): 112294403
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Entry
112294403 CDS
T01041
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112294403
Enzymes [BR:
ppp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
112294403
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
112294403
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
112294403
NCBI-ProteinID:
XP_024400520
UniProt:
A0A2K1J3Q8
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Position
17:9357544..9362275
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AA seq
622 aa
AA seq
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MRIVTYNVFSLRARLVPPRTLKSFLDSLESDIICLQETKLTRQELTAEIAVADGYESFFS
CTRTVSKGRVRYSGVATFCRTPTAVPVAADEGFTGLLHTNRTGEIEGGKARVGCYEEVLN
MENMSRQDLLQLDWEGRCLVTDHGSFVLFNLYGPSVGPDNEERYEFKLRFYRALQNRWEG
LLKNGRRVIAVGDFNISPFPIDSCHSDSNPDFDKSSIRQWFRSQLRANGGPFVDVFREIH
PIREGAYTFWNQMSGSEEFNYGTRLDLIIAAGGCFHQVRSEESNSLLKAEESHHFGTCEV
EDCDILLEFKRFKADSVPRRGGEKTQKLDGSDHVPVYVQLRPQPPLEQHDVPPLAARFMP
EIRGRQQSIASFLQKRSCSLIMDIEAQKETKPRLSLPTATCVRKNPPKVTKFLKSQNSKQ
KSLHSFFMLPTTKGKENTEAANAFKLAFQDSDSETLLKPSLEQSQTFVINSPHDGGLALP
EFDEGSIDASSSHMSRISRNDALPSSDSQETNAEPTDSSNTSSLKQDCTCESQNHVPEAV
ETVETAETNEKLSAKIEWQRIQKTMMNRVPMCSGHNEPCATYVMKKPGPNHGRKFHCCAR
AQGPSSNPEAKCKYFKWQNKYK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcgtgacgtataacgtgtttagtctgcgagctcgcctcgtaccgcctcgcacc
ttgaagtctttcctcgactctctcgagtctgacatcatctgtttacaggagaccaaatta
acaaggcaagagcttacggccgagatagcagtggcggatggatacgaatcattcttctct
tgcactcgaactgtctcaaagggacgtgtccgttattctggagtagcaacgttctgccgc
acacccactgccgtgcctgtagctgcagatgaaggcttcacaggtcttctccatacaaat
cgaactggagaaatagaaggtggcaaggcacgggttgggtgctacgaagaggttttaaac
atggagaatatgagtcggcaggacttactacaactggattgggagggtcgctgtctagtt
actgatcatggctcttttgttttgtttaatctttatggaccaagtgttggccctgataat
gaagaacgctatgaattcaagctaagattttatagagctctacagaacagatgggaaggg
ttgttgaagaatgggcgaagggtgatagcagttggggacttcaatatatcgcctttccct
attgattcctgccactctgattccaaccccgattttgataagagttcaattcgtcagtgg
tttcgatctcagctgcgagccaatggaggccctttcgttgacgtctttcgagaaatccat
ccaatcagagagggagcttacacgttttggaaccaaatgtcaggttcagaagaatttaat
tacggaacaagacttgatcttatcattgcggctggcggttgtttccaccaggttcggtcc
gaagagagcaattctctcttgaaggctgaagagagtcaccattttggaacttgtgaagtt
gaggactgtgacatccttcttgagttcaaacgcttcaaagctgactctgttccacgaagg
ggaggagagaagacccaaaaattggacggctcagaccacgtgcctgtttatgtgcaactc
agaccgcagccacccttagaacagcatgatgtgcctcctcttgcggcccgtttcatgcca
gaaattcggggacgccagcaaagtattgcatctttcttacagaaaagatcttgtagtctg
attatggacattgaagcacagaaggaaacgaagcctagattgtcgcttcccacagccact
tgtgtgaggaaaaatccacccaaagtgacgaagtttctcaagtcccaaaatagtaaacaa
aaaagccttcactcgttcttcatgctgccaacaacgaaggggaaggagaacactgaagcc
gcaaacgccttcaaacttgccttccaagattcagattctgaaaccctcttaaaaccaagc
ctagagcaatctcagacgtttgtgattaacagcccacatgacggaggtttagcccttccc
gagtttgacgaaggaagtatagacgcaagctcttcacatatgtctcgaatttcaagaaat
gatgcactgccatcatcagatagtcaagagaccaatgcggaacccacagactcgtccaac
actagctcactgaagcaagattgtacctgtgaatcacagaaccatgttcccgaggccgtc
gagactgtcgagaccgccgagaccaatgaaaaactatcagctaaaatcgaatggcagaga
attcaaaagacaatgatgaatagagtccctatgtgctctggccacaatgaaccttgtgct
acatatgtgatgaagaaaccaggccccaaccatggaagaaaattccactgctgtgcccga
gctcagggcccgtcttcaaatcccgaggcgaagtgtaaatattttaagtggcagaataag
tacaagtag
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