Physcomitrium patens (spreading earthmoss): 112294526
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Entry
112294526 CDS
T01041
Name
(RefSeq) protein CNGC15b
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppp04040
]
112294526
Ion channels [BR:
ppp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112294526
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
112294526
NCBI-ProteinID:
XP_024400828
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Position
17:complement(14409832..14413352)
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AA seq
732 aa
AA seq
DB search
MLGSSKVVAMNGEAKKFVRFRPLESQVSMGSDPKTPLRSSFSVDSSGVATGRRGWQRSSK
GFFKLGQSLKFKSSSQEYDEDMPKDLQWKTLDPSSPSLYKWNTFFLVSCLVAIFVDPLFF
YLPKVDYSNSCIRISRDLQASVTVFRTISDFFYVVHMVLRFRTAFVRPSTRVFGRGELVT
DPREIAIRYLKFDFWIDFVAVLPIPQVVIWLVVPHVDGVTSLNINTKDALRYIVVFQYVP
RMLRIFPLLSKMINSTGVLLETAWAGAAFNLILYMLASHILGATWYLLSVERQDTCWTDV
CLRNAPDKALCRREIFDCAWQGAAVNAWYGNFTTDSNVFCNYIAVPMGADTFNYGIYNNA
ISNTISSSDLAFSQTYFFCLWQGLLALSSLSQTLNVSTFVGEIIFTIIIIIVGLFLFAFL
IGNMQTYLQSLTLRLEEMRVKRRDTEQWMRHRNLPHDIVQRVRRYDQYKWVATRGVDEET
LVQSLPSDLRRDIKRHLCLRLVRNVPFCDQMDESLLDAMCERLRPALCTEGTHILREGDP
VNEMFFVIRGELKSETTNGGRTGFYNKAVLSSGDFCGEELLTWALDPKPQSHLPTSTSSV
KALKEVEAFSLSSDDLKFIASQFRRLHSKQLQHTFRYYSNHWRTWGACFIQAAWRRYQRR
RLAELRRKEEDQYLSLQGEPTDRISLGATILAGRFAKNAMRGVQRLRSMHAAELARISNI
PKPSEPDFSQDN
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcttggcagctctaaggtagtcgccatgaacggggaggctaagaagttcgtgaggttt
cggccattagaatctcaagtatctatgggttcggatcccaagacgccacttcgatcatcg
tttagcgttgacagctccggtgtggcgacagggcgacgaggttggcagcgaagctcgaag
ggattcttcaagctaggccagtctttgaagttcaagagctcgtctcaggaatatgatgag
gacatgcccaaagatttgcagtggaaaaccttggacccttcaagcccttcgttatacaaa
tggaacacgttcttccttgtctcttgtttggtggccatcttcgttgatcctctcttcttt
tacctccccaaggtggactacagtaatagttgcatcaggatatctagagacctgcaagcg
tcggtaactgtcttccgaaccatctcagattttttctacgtggttcatatggtgctccgt
ttccgaacggcgtttgttcgaccctcaactcgcgtgtttggacgtggggaacttgtgacc
gatccccgggaaattgccatccggtatttgaaattcgatttttggatcgactttgttgca
gtgttgccaattcctcaggttgttatttggctcgtggttccacacgtggatggtgttact
tcgctgaacataaatacaaaagatgctttgcggtacattgtggtgtttcagtacgtgcct
cgtatgttgcgtatcttccctcttctgtcgaaaatgatcaactccactggcgtgcttctg
gagactgcgtgggctggggcggcattcaacttgattttgtacatgctcgcaagccacatc
ctaggagcaacttggtacctgctatccgtggagcggcaagatacctgttggactgatgtg
tgccttcgcaatgcgcccgacaaggctttgtgtcgcagagaaatttttgattgcgcctgg
caaggcgcggcagtgaatgcttggtatggaaacttcaccactgattcgaacgtattttgc
aattacattgcagtgcctatgggtgcagacacgttcaattatgggatctacaacaatgcc
ataagcaatactatctcgtcaagcgaccttgctttttcccagacctatttcttctgcttg
tggcagggcttgctagctcttagttcgttgtcccagaccttgaacgtgagtacatttgta
ggggaaatcatctttaccataataattatcatcgtcggcttgttcctatttgccttcttg
atcggcaacatgcagacatacttgcaatcgttgacacttaggctggaggaaatgcgagtg
aaacgtcgagatactgagcaatggatgcgtcatcgcaatcttccccatgatatagtgcag
agggtccgtcgctatgatcagtacaagtgggtggccactcggggagtggacgaagaaacg
cttgtgcagagtctcccctctgacttacgtcgagacatcaaacgtcatctctgtttgcga
cttgttcgcaatgtgccattctgtgatcagatggacgagagtttgctcgacgctatgtgc
gagcgcctgaggcccgcactttgtaccgagggcacacacatcctccgagagggcgatcca
gtcaacgaaatgtttttcgttattcgtggtgaactgaaaagtgagactacgaacggaggc
cgaactggattttacaacaaagcagtcctctctagtggagatttctgtggtgaagagcta
ctcacctgggctttggatcccaaaccccaaagtcatctcccaacctccacgtccagcgtg
aaggcattgaaggaggtagaagctttctctttgtcttcagatgacttgaagtttattgcc
agccagttccgacgacttcacagcaaacaactgcaacacactttcaggtattattctaat
cactggcgtacatggggagcctgcttcatccaagcggcgtggcgaagataccaacggcga
cggttggcggagcttcgtcgcaaagaggaggatcaatacttgtccctgcaaggggaaccc
acagacaggatcagtctgggggcgacgatcctcgccgggaggttcgcgaagaatgccatg
cgcggagtgcaacggcttcgaagcatgcacgctgcagagcttgcgcgaatctccaacatc
cccaagccttcggagccagacttttcccaagacaattga
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