Physcomitrium patens (spreading earthmoss): 112294798
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Entry
112294798 CDS
T01041
Name
(RefSeq) peroxisome biogenesis protein 12-like
KO
K13345
peroxin-12
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112294798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112294798
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
112294798
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
zf-C3HC4
Crystall_3
Motif
Other DBs
NCBI-GeneID:
112294798
NCBI-ProteinID:
XP_024401409
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Position
17:complement(4855367..4859109)
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AA seq
394 aa
AA seq
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MLMQVGGDGARPTFFEMSATEHLPTSLRAALLYFLGVMAQRRPILHRVLDFSDEGYAALM
FLLEFHSLKTTDSSFAESLYGLRRIPATDALPQQQGPQASSPGPRPLTGKQRAASVFFLV
GLPYLKYKLEAAVNAQRGDALQAALWGRGDLEDEDVDSMEPPREVDNVHNEQVFFGSGTP
WRERFKHIAIRALVKCYPWVHAATEGVSFAYQLLYLLDATRFYTPALHFMGLQVRRATGQ
ELMDAVKVIEERRQHEFGRIRGPSYIQTLQRGVLRFIYTALDYAQTGLIASVFLFKMVEW
WYQSAEERVTAPAVYPPPPPPPPPVVGKDGLQLPADGKICPLCLRSRTNPAVVATSGFVF
CYTCAFHYVTQYKRCPVTLAPTATNQILRLYQDD
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgcaggtgggaggcgatggcgctcgccccaccttctttgagatgtcggcgaca
gaacatcttcccactagcttgcgggccgctttgctttatttcctcggggttatggctcaa
agaagacccatactacaccgagttttggattttagtgacgaagggtacgcagccctaatg
tttcttctggagtttcacagcttaaagacaacagattcttcgtttgctgaatcgctgtat
gggctgcgacgaataccagcaacagatgctcttcctcagcaacaaggtccacaagcaagt
tccccaggccccaggcccttgactggcaagcagagggctgcctcggtttttttcttggtt
ggcctgccatatttgaaatacaaactcgaggctgctgtgaatgcacagaggggcgatgct
ctccaggctgccctgtggggtcgtggagatctggaagatgaagatgttgatagtatggaa
ccgccaagagaggttgacaatgtacataatgaacaagtgttcttcgggagtggcactccc
tggcgagagcggttcaagcatatagcaattcgagcacttgtaaaatgctatccatgggtt
catgcagcaacagaaggtgtctcatttgcatatcagctgctttatcttttggacgccacc
cgcttttacacgcctgctcttcatttcatgggacttcaagtgcgccgcgccacaggtcag
gagctgatggatgcagtaaaagttatcgaagagagacggcagcacgagtttggtaggatc
agaggaccatcttacattcagacattacagaggggcgtccttcgttttatatatacagct
ttggactacgcgcagacaggcctcattgcgagtgtctttctcttcaagatggtggaatgg
tggtaccagtctgcagaagaaagagtgacagcacctgctgtttatcctccaccccctcct
ccgccgcctccagtggttggtaaagatggactgcaattgccggctgatggcaagatctgc
cctctctgcttacgttctcgtaccaatccagcagtggtggcgacgtccggctttgtcttc
tgttatacatgtgcttttcactatgtcactcagtacaaacgatgtccagttactcttgct
cccacagcgaccaaccaaattctgcgactgtatcaagatgattaa
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