Physcomitrium patens (spreading earthmoss): 112294846
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Entry
112294846 CDS
T01041
Name
(RefSeq) serine/arginine-rich splicing factor SR30
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112294846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppp03041
]
112294846
Spliceosome [BR:
ppp03041
]
Common components
Common spliceosomal components
SR proteins
112294846
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
112294846
NCBI-ProteinID:
XP_024401528
UniProt:
A0A2K1J4D6
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All DBs
Position
17:complement(11937485..11942383)
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AA seq
333 aa
AA seq
DB search
MSSRASRTIYVGNLPGDVREREIEDIFYKYGRIVDIDLKLPPRPPGYCFLEFEDARDAED
AIRGRDGYNFDGNRLRVEIAHGGRGPPPAVDRYSGHSSGGGRGGGGGGGSAAESGGRAGG
VSRRSEYRVMVTGLPSSASWQDLKDHMRRAGDVCFAQVFRDGSAGTMGIVDFTNYDDMKY
AIRKLDDSEFRNPFSRSFIRVKEDKGYGSRRSVTRSRSPRSRSRSRSKTPRSRSPRSRSR
SPRSATPASRSRSRSRSVRSPSKSRSPSPVQGSPLRKDSRSPSLSRSKSPVAVANGKSSS
DAEKNGSLSPKAGDLNGRVSERSVSPVSENGKE
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgtgccagccgaacgatttatgtcggaaaccttcccggtgatgtgagggag
cgagaaattgaagacattttctacaagtatggacgaattgtggatatcgacttgaagtta
cctcctcgtcctcctggttactgttttcttgagttcgaggatgccagagacgctgaagat
gcaattcgtgggcgcgacggatacaactttgatggaaatcggttgcgggtggaaattgcc
cacggtggacgagggcctccgcctgcagtagatcgttacagtggccacagcagtggtggt
gggcgaggagggggaggaggcggagggagtgcggctgaaagcggcggtcgtgcaggaggg
gtctctaggcgctcagagtatagggtgatggtgaccggattaccctcgtctgcgtcatgg
caagatctgaaggatcacatgcgcagggctggcgatgtgtgcttcgcccaagtcttccgt
gatggttctgctggaacaatgggcattgtggatttcaccaactacgacgatatgaaatac
gccattcggaagttggacgactcagaattccgcaacccattttctcgttctttcattcgg
gtgaaagaagataaaggttacggatctcgaaggagcgtcactcgaagccgttcaccacgt
agtcgcagccgttctcgtagtaagactccccgcagccgctctcctcggtcacgttctcgg
tcaccacggtctgcgacccctgcatctaggtcacgttcacgttcccgctccgttcgctca
ccctccaagtcaagatcaccctcccctgtacagggatctcctttaaggaaagatagtcgg
agtcctagcttgagtcgatcgaagtctccagttgctgtggcaaatggaaagagctctagt
gatgccgagaaaaatggtagcttgagtccgaaggctggagatctgaacggtcgggtttct
gagcgcagtgtttctcctgtgtcggagaacggaaaagaatga
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