Physcomitrium patens (spreading earthmoss): 112294861
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Entry
112294861 CDS
T01041
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03015
mRNA surveillance pathway
ppp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112294861
09122 Translation
03015 mRNA surveillance pathway
112294861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppp03041
]
112294861
Spliceosome [BR:
ppp03041
]
Complex A
Other components
Complex A specific factors
112294861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
RRM_7
Motif
Other DBs
NCBI-GeneID:
112294861
NCBI-ProteinID:
XP_024401561
UniProt:
A9T0V1
LinkDB
All DBs
Position
17:1185682..1188336
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AA seq
336 aa
AA seq
DB search
MSGYGGGGGSGRYRDGGGPGGAVGDRGGSRGGVGGGQRGGFRDGSGGGRGGYGGGGGVGG
YGGGGGGGGYGGGGGGGGYGGGGGHDRGGSRGGGSGDRSGDWTCLNAGCGNVNFARRMEC
NKCQASKPQSAAGGGGGGYGGREGGGNSYDEGGQGGYGGRGHDREQGRAYESRGGGYGAQ
PREDITVDGSKDVPVKQCDENCGDSCDNARIYISGLPLDVKEDELQELFGGIGQVARVKQ
KRGYKDQWPYNIKIYQDESGKNKGDAVLSYEDPHAAHSAGGFFNDYEMRGHKIKVAMAAK
SAPKPPPPAGGGYRGGQRGGGGPDRRDGGGYRSRPY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttatggaggagggggagggagtggccgatatcgcgatggcggaggaccaggg
ggtgctgtaggggatcgaggaggctcgcgaggcggggttgggggtggccagcggggtggt
tttcgtgacggaagtggtggaggaagaggaggttatggtggtggcggaggtgtgggaggg
tatggtggtggcggaggtgggggagggtatggtggtggcggaggtgggggagggtatggt
ggtggcggtgggcatgatcggggtggttcacgaggaggtggaagcggagacaggagcgga
gattggacttgcctgaatgcgggctgcgggaacgtgaattttgcacgacggatggaatgt
aataagtgtcaagcctcgaagcctcaatcagcagcaggaggcggaggaggaggctacggt
gggagggagggtggtggaaacagttatgacgaaggtggccagggaggatatggtggaagg
ggccacgatagagagcaggggagagcatatgaaagccgcggcggagggtacggggcccaa
ccaagagaagacatcacggtggatggttctaaggacgtccctgtaaagcaatgtgatgag
aactgcggtgacagttgcgataatgcaagaatctatatttcaggattgcctctagatgtg
aaagaagatgaactacaggaactttttggtggtattggacaggtagcaagagtgaaacaa
aagcgtggttacaaggatcagtggccgtacaacatcaagatctatcaagatgaaagtggg
aagaacaagggagatgcggtgttgagctatgaagatcctcacgcagcacactcggcggga
gggttttttaacgattatgaaatgagagggcacaaaataaaagttgcgatggctgcgaaa
tcagctccaaaaccgccacctccggccggaggtggatatcggggtgggcagcgcgggggt
ggtggtcctgacagacgggatggtggtggatatcggtctcgtccttattga
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