Physcomitrium patens (spreading earthmoss): 112294887
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Entry
112294887 CDS
T01041
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13114
pinin
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03013
Nucleocytoplasmic transport
ppp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112294887
03015 mRNA surveillance pathway
112294887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112294887
03041 Spliceosome [BR:
ppp03041
]
112294887
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112294887
Spliceosome [BR:
ppp03041
]
Complex C
Other components
EJC/TREX
112294887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
112294887
NCBI-ProteinID:
XP_024401628
UniProt:
A0A7I4B8W0
LinkDB
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Position
17:complement(9340537..9345133)
Genome browser
AA seq
447 aa
AA seq
DB search
MATLEAAKTAEDLRREIDELHRQQREINERLRDPKGLRRNALGGKARNIDADGSHQRKNA
PRGVIRRGDGFDGYEQRPGKRRLLSAVVKVVQEEKLPETDNEIEENKKTQPDKDDADEET
DLADRRPTLQRNYNADHSNPLPAVDSQRRGNSDSNTRTSTTGGHRSGGPGGPRRFPKERG
FLVRVSNPHQNDDAQPAEPAPRVLSKTSDPNVAKRNRRMFGALLGTLEKFRREDEKLSGS
ESFQRRSEQLKKAEHKAQEENERLRQQEKEALAEKRRADLILRAKLATEAEAKQLELLFL
QWAEHHTRLASFIKTKAGPRIYYLPVKSSEETDKLLQEAQQDLEEWKARSREELSECQKR
ISELSMENLDADFERWKDGPPGRTEVSNNKLAAEANTGVESGDNIPEQPGEGDEIVEDKH
DDTGAILVDEHERVKIEDAGTNKLVNV
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcgacattagaggcggcgaagaccgctgaggacctccgtcgcgagattgacgaactc
caccgccaacagcgagagattaatgagcgactgcgagatccgaaagggttacgcagaaat
gctctcggcggtaaagcgaggaacattgatgcggacggttctcaccagcgcaagaacgcc
ccgcgaggtgtcatcaggcggggggacggctttgacggctatgaacaacgtcctggaaag
agaaggttgctttcagctgtagtgaaggttgtgcaagaggagaagctgccggaaacagac
aatgaaatagaagaaaataagaaaacccaacctgataaagatgacgcagatgaagaaact
gatcttgcggatcggcggccaacacttcaacgcaattacaatgcagatcactctaatcct
cttccagcagtagattcgcagcgaaggggcaactccgactcaaacacgcgcacttctacc
acgggcggacatcgttctgggggaccaggaggaccaagaaggtttcctaaggagaggggc
ttccttgtccgtgtcagcaatccacatcagaatgacgatgcacaacctgctgaaccagca
cctagggttctgtccaagacaagtgatcctaatgttgctaagcgcaaccgacgtatgttt
ggggctcttttaggtactttggagaaatttaggcgggaggacgaaaagctatctggatca
gaatcatttcagcgtcgatctgaacagttgaagaaggcagaacacaaagcccaagaagaa
aatgagcgtttacgtcagcaagagaaagaagccttggctgagaaacgtcgagctgacctg
atcttacgagcaaaactggcaacagaagctgaggccaagcaattagagctcctctttttg
cagtgggcagaacatcatactcggcttgctagcttcattaaaacaaaagcgggacctaga
atttattatctaccagtgaagtctagtgaagagacggacaagttgctccaggaagcccag
caggatctggaagaatggaaggctagatcacgtgaagaattgtctgagtgccagaagcga
atatctgaactgagcatggaaaacttggatgctgattttgagagatggaaagacggacct
cctgggcgaactgaagtctccaataacaaactggctgctgaggctaatacaggagtagaa
agtggtgacaatatccctgaacaacctggagaaggagatgaaatagttgaagataagcat
gacgacactggtgcgattcttgtagatgagcatgaaagggtcaaaattgaggatgcgggg
actaacaaattggtcaacgtatag
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