KEGG   Physcomitrium patens (spreading earthmoss): 112294966
Entry
112294966         CDS       T01041                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112294966
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppp03019]
    112294966
   03041 Spliceosome [BR:ppp03041]
    112294966
   03032 DNA replication proteins [BR:ppp03032]
    112294966
Messenger RNA biogenesis [BR:ppp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     112294966
Spliceosome [BR:ppp03041]
 Complex A
  U1 snRNP components
   Sm proteins
    112294966
  U2 snRNP components
    112294966
 Complex B
  U1 snRNP components
    112294966
  U4/U6.U5 tri-snRNP components
    112294966
 Complex C
  U2 snRNP components
    112294966
DNA replication proteins [BR:ppp03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     112294966
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 112294966
NCBI-ProteinID: XP_024401765
LinkDB
Position
18:complement(15209420..15211848)
AA seq 137 aa
MSKSLGIPVKLLHEAEGHIVTVELKSGEVYRGSLIECEDNWNSQLESITYTAKDGKVSQL
EHVFIRGSKVRYMIIPDMLKNAPMFKRLDAKIKGKGSSGVGVGRGRASTMQAKARSAARG
SVPPPMGGRGAAPPMRR
NT seq 414 nt   +upstreamnt  +downstreamnt
atgagtaagagtctgggcatcccggtgaaattgctccatgaggcagagggtcacattgtg
accgtggagttgaagagtggggaagtttatcgcggatccttgattgaatgcgaggataat
tggaactcacagctcgagtccatcacctatactgctaaggacggaaaagtctctcaatta
gaacacgttttcattcgaggaagtaaagtgagatatatgatcattcctgatatgctcaag
aatgcccctatgtttaagcgcctggatgccaagattaagggtaagggatcgtcaggtgtt
ggggttggtcgtggtcgagcatctaccatgcaggcaaaggctcgatcagccgccagaggc
tccgtaccacctccaatggggggtagaggagctgcacctcccatgagaagataa

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