Physcomitrium patens (spreading earthmoss): 112295055
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Entry
112295055 CDS
T01041
Name
(RefSeq) probable acyl-CoA dehydrogenase IBR3 isoform X1
KO
K00249
acyl-CoA dehydrogenase [EC:
1.3.8.7
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00071
Fatty acid degradation
ppp00280
Valine, leucine and isoleucine degradation
ppp01100
Metabolic pathways
ppp01110
Biosynthesis of secondary metabolites
ppp01212
Fatty acid metabolism
Module
ppp_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
ppp_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
112295055
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
112295055
Enzymes [BR:
ppp01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.7 medium-chain acyl-CoA dehydrogenase
112295055
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Gene cluster
GFIT
Motif
Pfam:
APH
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA_dh_N
Motif
Other DBs
NCBI-GeneID:
112295055
NCBI-ProteinID:
XP_024401950
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All DBs
Position
18:15174469..15181479
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AA seq
833 aa
AA seq
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MIEIRREMAKNTMTMVVPVDSAHRLDEGRLLSYLQTHVKGFLPPPASLKISQFGHGQSNP
TYLLQVELNRCVQRYVLRKKPPGQILQSAHAIEREYQVLFALGEGKTKVPVPCVYCLCTD
STVIGTPFYVMEHLEGRLFVDATLPGMDPKERRAIYGEMARVLAAIHAADVDAIGLSRYG
RKDNYCKRQVERWTAQYHQSTGKGKPDPDPNMLEVIQWLRENIPAEDGTAGSKTGIVHGD
YRLDNLIFHPSEPRVIGVLDWELSTLGNQMSDAAYNCLPYVIDSDELPGKNIGFSKQLVD
GIPSLPEYVAEYCSAADVSWPANTWNFYTVLSLFRYAAICAGVFLRMLQGNASGGKRAED
AGKMALFFAATALRLAKRGPILPPRPPSASLELPARSTGPDSSSQNLLGFAPSARVQELR
KRLISFMERHIYPSENELNDLMYSNARWTIHPTEERLKKLAKSEGLWNLWIPADSAALAS
DLMSETEKAMRSKDSADRLVGAGLSNLEYAHLCEILGRSMWAPQILNCNAPDTGNMEVLL
RYGNSEQQRKWLRPLLEGEIRSGFAMTEPNVASSDATNIECSMVREGDEYIINGHKWWTS
GAMDPRCQLLIVMGKTNPNAAMHKQQSMILVDINTPGVKIVRPLLVFGFDDAPHGHAEVK
FENVRVPVTNLLLGEGRGFEIAQGRLGPGRLHHCMRLVGAAERGMDSMVKRATQRKAFGK
TLSQQGSFAHMLAKSRLDIEQTRLLVLNAAHQLDLYGNKVAKGAIAMAKVAAPNAALRVL
DNAIQVHGGGGVSSDFPLSHLWASARTLRLADGPDEVHLGTIAKLELQRVSKL
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaattagaagggaaatggcgaaaaatacaatgaccatggtggttcccgtggat
tctgcccaccggcttgacgagggacgactattaagttatttgcaaacacatgtcaagggt
tttctgcctccgcctgcatccttaaagatttctcagtttggacatggacaatcgaatccg
acataccttctgcaagtggaactgaataggtgtgttcagcgctatgtgcttcggaagaaa
ccacctgggcaaattctccagtcagctcacgctattgagcgcgagtatcaggtcttattt
gcattgggtgaaggcaaaaccaaagtgcctgttccatgtgtatactgcctgtgcacagat
tctacagtgattggcactccattctatgttatggagcacttggagggacgtctgtttgtg
gatgcgactttgccaggtatggatcccaaagagcgaagggcaatatatggtgaaatggcc
agagttctggctgctattcatgcagcagatgttgatgccatagggttgagtcgatatggg
cgcaaagataattattgcaagagacaggttgaaaggtggactgcacaataccatcaatcg
acaggtaaagggaaacctgatccagatcccaacatgttagaagtcattcaatggttacga
gagaatatcccggcagaggatggaactgctggttctaagaccggaattgtgcatggagat
tatcggcttgataatctcatatttcatccttctgagcctcgtgttatcggtgtcctggat
tgggaattgtcaacacttggaaatcagatgtcagatgctgcctacaactgcctgccctat
gtgattgatagtgacgagcttccaggcaaaaacattggttttagtaaacagcttgtagat
ggaataccatcgctaccagaatacgttgctgaatattgtagtgctgctgatgtttcctgg
ccagcaaacacgtggaatttctataccgtcctttcattgtttcgatacgctgccatctgt
gctggagtttttttgcgtatgcttcagggcaacgcttctggtggtaaacgagcagaggac
gcagggaaaatggcgctattctttgctgcgactgcgttgagattggctaagcgagggcca
attttaccacctcgacctccttctgcttctctagaacttcctgcaaggagcactgggcct
gacagttctagtcagaatctgttggggtttgctccttcggcgagagtacaggagctaagg
aaaaggttgatatcctttatggaacgacatatctatccaagtgaaaatgagcttaatgat
cttatgtactctaatgctaggtggaccattcatccaaccgaagagaggcttaagaagttg
gccaagtcagaagggctttggaatctttggataccggcagacagtgctgctctggcgtcg
gatttaatgtctgagactgagaaagctatgcgttctaaagattcagccgatcggctagta
ggagcgggactgagcaatttggagtatgcccacttatgtgagatcctagggaggtccatg
tgggctcctcaaatattgaactgtaatgctcctgacacaggaaatatggaggtcttatta
cggtacgggaactcagagcagcaaagaaagtggttgaggccattgctagaaggagagata
cgctctggatttgccatgactgaacccaatgtggcatcttctgatgcgactaatatcgag
tgttcaatggttagagagggagacgagtatattatcaatggccacaaatggtggactagt
ggtgcaatggatccacgatgtcagttgcttatagtgatgggtaaaacgaacccaaatgct
gctatgcacaagcaacagtctatgatacttgtagatatcaacacgccaggcgtgaaaatt
gtcaggccactgttagtttttggcttcgatgatgctccccacggccatgccgaagttaag
tttgagaatgttagagtccctgtcaccaatttgttgctaggcgaaggccgaggatttgag
atcgctcaaggtagattaggcccagggcgtctacatcactgcatgaggctagtgggcgct
gcagagcgtggcatggattcgatggtgaagagggcaactcagcgaaaagcatttggcaag
accctttcccagcagggctcatttgcccatatgctagccaagtctcgactagatattgag
caaactcggttgcttgttctgaatgctgctcatcagttggatttgtatggcaataaagtc
gccaaaggtgcaattgccatggcaaaggttgctgccccgaacgctgcattgcgagtactg
gacaatgctattcaagttcacggaggtggaggcgtgagttctgacttcccattgtcacac
ttatgggcaagcgcgcgtactctcaggctagcagatggaccagatgaggttcatcttggc
accattgcaaagctcgaattgcagcgcgtatccaagctttga
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