Physcomitrium patens (spreading earthmoss): 112295137
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Entry
112295137 CDS
T01041
Name
(RefSeq) protein argonaute 4B
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112295137
03036 Chromosome and associated proteins [BR:
ppp03036
]
112295137
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112295137
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112295137
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112295137
microRNA pathway
RISC loading complex
112295137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
VBS
Motif
Other DBs
NCBI-GeneID:
112295137
NCBI-ProteinID:
XP_024402123
UniProt:
A0A2K1J0H2
LinkDB
All DBs
Position
18:complement(6779642..6786044)
Genome browser
AA seq
961 aa
AA seq
DB search
MDGAEVMSGMSEVGLPLPPPPPVPPGAFPAISPGYEKALPPSGLNREPNEGHTGHDGTPK
GASGSSAPISPALARIPLPKKATRPSFGKLGRPSKLCMNHFKTSIVKWDDVYQYSVSIEP
SVKDKKQCREIMKKLRETYGEAECGGKQGAYDGENCLFTSGSLSFNTKEFPVFLEDSKGS
SYRPGDRDGKTGDSTSTHSPTGQEVFPKRRKTVSRGREFSVKIEFAATIRMKVIDDMMKG
VMGKGDLDQETRALDALRVLDIVLRENASERGYLLVRDNFFHPELGPVGDLGEGVEAWRG
YHSSIKPTGLGLTLNLDVTMTTILKPITVEKFLAEYFGVRDLNGLQARNWTKAKSILKGV
KVETTHMSVSREHKISGFSDRAIRDLKFSRRVKDGEGNIGEEEISVQQYYSDVYMYTLRF
PDLPALVSGNKKKATFLPLELCKIIAGQRYTKSLSSKQRQLQIAACKQSPQERQRICENA
MEVSKYSSDKLIAEFGLKFESSLAGVTGRILRPPQLEFGHGRTEEPRDGRWNFNQKELKQ
GARIDTWAVAIFDGRCSDGQRIAESLVDCCCKRGMQMRQAAIVEKEPPSSQRFSPEQRVE
RMITALKQTKPVFILVILPDKDSPIYVPFKRFCEMKIGVVSQCMVKPRQLNDQYLGNLAL
KINLKMGGFNSPLSPRMVSCLGPSTIIFGMDVSHGSPGESSVPSIAAVVATKNWPDVFHY
STQVRIQPAKTEMIEGLHDSKGGMVKECLKAYYISCRSPNYRKPTQIIVYRDGISESQFA
ECLEVEFTAFKRACAELEEGYNPGITFIVAQKRHNTRFFPQGPDNQMRNGNVLPGTVVDK
DACHPHNYDFFLVSQAGLIGTSRPTHYHVLVNENKLSPDDIQGLTNNLCYTFGRCTTSVS
MAAPAAYAHVVATRYRKLVDTMGGGSDTSSFRSSKEGGAPKPPFPDLPVLKIKPEHSMFF
C
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgccgaagtcatgtcaggaatgtctgaagtagggctccccctgccaccgcct
ccgccggtgcccccaggagcttttcctgccatatccccaggctatgaaaaggcattgcct
ccgtctgggctcaaccgtgaaccgaacgaaggtcacactggtcatgacggaactccaaag
ggagccagcggcagctctgccccgatttcaccagcgctggctcgaattcccttgccgaag
aaagcaacaagaccaagctttggaaagcttggacgtccttctaaattgtgtatgaatcac
ttcaaaaccagcatagtgaaatgggacgacgtttaccaatatagtgtgtcgattgagcca
tctgtgaaggacaagaagcaatgtcgtgagatcatgaagaagctccgggagacatatggg
gaggctgagtgcggtggaaagcagggtgcttacgatggggagaactgcttgtttacaagc
ggtagcttgtctttcaatacaaaggagttcccagtgttcctggaggattcaaaaggctcc
tcgtatcgacctggtgaccgggatggaaagaccggcgacagtacatcaacgcacagtcct
acaggtcaagaagtctttccgaaaaggagaaagaccgtgtcccggggaagagagttttcg
gtgaaaattgaattcgcggccactattcggatgaaggttattgatgacatgatgaaggga
gtgatgggcaagggtgatttggaccaggagacacgagctcttgatgcattgcgcgtgctg
gatatagtgcttcgtgagaatgcttccgaaagaggctatcttcttgttagggacaatttc
ttccatccagagttgggtccggttggcgacttgggagaaggagtggaggcttggagaggt
tatcactcgagtataaagccaactggattggggttgactctcaaccttgatgtcaccatg
acaactatactgaagcccattacggtagagaaattccttgctgaatatttcggtgtcaga
gacctgaatggcttgcaagcaagaaactggactaaagcgaagtccatccttaaaggtgta
aaggtcgaaacaacacacatgtctgtgtcacgcgaacataaaatctcaggtttcagtgac
cgtgccattcgggatctcaagttctcgagaagggtcaaagatggtgaaggcaatattggg
gaagaggaaatttcagtacaacagtattactctgacgtgtacatgtacactctaaggttc
ccagaccttccagcacttgtttccgggaacaaaaagaaggccacgttcctaccattggag
ctgtgtaagattatcgctgggcaacggtataccaagtctctatccagcaagcaaaggcaa
ttgcagatcgccgcttgcaagcagtctccgcaggagcgtcagaggatctgtgagaatgct
atggaagtcagcaagtacagctccgacaagctgatagcagagttcggtctgaagtttgag
agcagtctggccggtgtcacaggcaggatattaagacctcctcagcttgagtttggacat
ggaaggaccgaggaaccaagggacggacggtggaacttcaaccagaaggaactgaagcaa
ggagcaagaatcgatacctgggctgttgctatatttgatgggcgctgcagtgatggtcaa
cgcatcgcagaaagtttggtcgactgttgctgcaagagaggaatgcaaatgcggcaagca
gcgattgtggagaaagagcccccgagttctcagagattttctcctgaacaacgggttgag
aggatgattaccgcactaaagcagacaaagcctgtatttatcctggtcatattacctgac
aaagacagtccaatatatgttccattcaagcggttctgtgagatgaagattggggttgtt
tcgcagtgcatggtgaagcctcgacagcttaatgatcaatacctgggaaatctcgccttg
aagattaatctcaagatggggggattcaattcgccgcttagccccagaatggtttcctgt
cttggcccgtcgacaatcatctttgggatggacgtgtcgcatgggtcgcctggagaatcc
agtgtcccttcgattgcagccgtggttgcaaccaaaaattggccggacgtttttcactac
tcgacgcaagtgagaattcagcccgccaaaacggagatgatagaagggctccacgattcg
aaaggtggaatggtcaaggaatgcttgaaagcatactacatatcatgcagaagtccaaac
tatcgcaaaccaacccaaataattgtttacagggatggaatcagtgaaagtcagtttgca
gaatgtttggaggttgagtttactgcgtttaaaagggcatgtgcagaactggaagaagga
tataatcccggtatcaccttcattgttgctcaaaagcgacacaatactcgtttctttcct
caaggccctgacaatcagatgcgcaatggaaacgttcttccaggaactgttgtcgacaag
gacgcttgccaccctcacaactatgactttttcctcgtctctcaagctggccttattggt
acgtctcgtcccacgcactatcacgttctcgtgaatgaaaataagctttcgcctgatgac
attcagggcttgacaaacaatttgtgctacacgtttggccgctgcacaacatcagtttct
atggcggccccagcagcttatgcccatgtcgtggcaacgcggtataggaagttggtggac
accatgggagggggttcagacacttcttctttcaggagctcgaaagaaggcggtgctcca
aagcccccttttcccgatcttccagttctaaagatcaagccagagcattctatgttcttc
tgttaa
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