Physcomitrium patens (spreading earthmoss): 112295141
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Entry
112295141 CDS
T01041
Name
(RefSeq) uncharacterized protein
KO
K11797
PH-interacting protein
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112295141
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112295141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT122_1st
NBCH_WD40
Bromodomain
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
WDR90_beta-prop_4th
VPS8_N
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
112295141
NCBI-ProteinID:
XP_024402127
UniProt:
A0A2K1J0C0
LinkDB
All DBs
Position
18:5726337..5740979
Genome browser
AA seq
1964 aa
AA seq
DB search
MMARSTKDRPDYLGRFSAPVVAGSSGTAYGADTCPENNVEVDIAEVYFLIMHFLSSGPCQ
RAFAQLSNDVLQHKLLPRRFHALSSRAEKHVVDEGDDGMSSPLSYANILARNPTVQQNHL
VKLLEQLLVHNRASVEHLEHPNSRIPTAADVPTLLGTGSFSLFDSERRKAIKDVPQWIRQ
LRWPHWHADQVHGLMFRELGGGYARHKQAPSVRTPSYAIVKPAVLVDRIQIIKKLRGHRN
AVYCAIFDGTGRYVITGSDDRLVKLWSSETGLCLRSCRGHEGDITDLAVSNRNKYVASAS
NDFTIRVWFLPSGNPVSVLRGHTASVTAIAFSPRQGCEHLLLSSSDDGTCRIWDASDSSL
HSRVYMPNPKDVASAPRPTIPAPPSTVPGCNQILCCAFNADGSIFVTGSSDKIARVWDAC
KWNDDVTGRPNYEMDTLKGHENDVNYVQFSGCAAPRKPLVGDSMKDEHATRFRNSWFSHD
SIVTCSRDGTAIIWMHHFSKSYAKVGRWQKAYHLRVPPPPMPPQPPRGNGPRQRLLPTPR
GVNMIVWSLDNRFVLAAIMDHRICVWNASDGSLVHSLTGHDKQTYVLDVHPINPRIAMSA
GYDGRVIIWDIWEGRPIKVYETGEYNLVDGNFSPDGTSLVVSDEVGQIYLFGTGSKMSEK
DVKYDQFFLGDFRPLVRDVHGNVLDVETQQPPHLRNLRDLLCDAGMIPYCDPYQTIFQQR
RLANLGLEWHPPVMQLSIGTNDDVTYFPPEQPMAFQPPVAPSPERHDLPVPTDAGRNRWV
EQPPEVEEPMDWEQDAAVHSEDTGSDYSASEESVSDEKEGEGYESLSEGESNSEEESEAP
MHLRRSGRNKRKKMESGRSSSRRVRGRTSADYDTRKRRQQRGRRLKASRNSSYRASRAVV
VSDQEHVSTRPQRQAARNALNLFSSIQTPGREEDEDSAEHGEKSEAVDNGQEHGEPSSMA
AADLEGEIRSLRRNPREEVEEESEQRVHASTSQPEVDNLGDCRRPRSQRPRRIKIIFNRP
AGPAHGSSQFDGLREGEANALHPSDDIAISVSPSRENIPPEQIQKSHRKLIIKPPKPISQ
EGGSSDEDGDTIGGQGMNVPALAQESPIRSPDIAHSTSEGIVGQENHWQWKRGKEINGAL
GSGSSKHGEPSKDNESLESFERAILSNECAQTHTWEQPQHPDNSRSEDANVRNESHNSER
ERTQNNANVSNDYGAHEDNLSSVHELADTLSQKVDLNKDPDTEERRSKDTERELRSEQNA
NQSLMENTFSDRSPVSSEAGGTSRLQSTSKVETENKYQLQEMPASSREIEDGDYADDVDE
GQERAGHMQDSEQHLIETGGTDHETREYSDEDSNAGRNGVLNNDRTINTSVSLEERQHQL
DTDEAETRRDHLCDDNEDVIGYETGQDHPEGSTEKQASESEMDEYEYAGQEENESKEFED
TPRSFKNRSRRQNKYESTEGRSRSAERKRHKPLSELNSGHGHSLLSDEAPSPAKRSTRHV
RTAPEGNGRRTQPWLREHQEAEELAGPSRSVSHTQVRGKSKRQPSNKLHDMVWESEPRNN
GVSHGRQGLRSDASPSGSKIDRPLRLKLKCTENSAKRNEGLPDEDDDNGENQTRVSARST
RRQISLQKERAKVVEVKVGVTNSIPRSSWRAPRNNLRKIESASWLLTSEVEQGHYTPQFG
DEVAYLHQGHREYLEASKVKEKGPWKKHELRAVEFCRITNLEYHIEPGGGTSCKLELEFL
DMESSASGYKFQLTWPELTDYPDFLVEKSRFDASMAKGWVARDHCKVWWASEKGADEKGQ
WWDGRIKTIKAKSDDFPDSPWEKYIVTYRESAEPQAHSPWELFDRNCNIPGWTVPQIEED
ERDELLQYIYDIEEAMLEDETDGFGVKQLESLAKHDSNFLNRVPVPLTLELIRERLSKNF
YRSKDAVEYDIRLLATNAELFFGDEDDFTGKMNRLASELLEILQ
NT seq
5895 nt
NT seq
+upstream
nt +downstream
nt
atgatggccagatctaccaaggaccggcctgattacttgggtcgtttcagtgcacctgta
gtggctgggagctcaggaacagcctatggtgcggatacttgccccgagaacaatgtcgag
gtggacattgcagaagtttattttctcatcatgcactttctgtccagtggcccgtgtcag
cgtgcatttgcacagctttcaaatgatgttctgcagcataagcttcttcccaggcgcttt
cacgcgttgtcgtctcgtgcggaaaagcacgttgtcgatgagggagatgatggcatgtct
tctccattaagttatgcgaacattttggcaaggaatccaactgtacaacaaaaccatctg
gtgaaattgttggagcagttgcttgtgcataatcgagcatctgttgaacatttggaacat
ccgaactcaaggatccctacagcagccgatgtccctacgcttcttggaactggaagtttc
tcactgtttgattctgaaaggaggaaggccataaaagatgtccctcaatggatccgccag
ttgcgatggcctcactggcacgccgatcaggttcatgggttgatgtttcgtgagcttggt
ggaggatatgcaagacacaagcaagctccttcagttcgcactcctagttatgctattgtg
aagcctgctgtcttggtcgatcgaatacagataattaaaaagttgagaggacatcgcaat
gcagtgtactgtgctatttttgatggcacagggcgatatgtaataactggttctgatgat
cgactcgtgaagttatggtcgtcggaaactgggctctgtcttcgtagttgtcgaggtcat
gagggtgatataacagatttggctgtgagtaatcgcaacaaatatgttgcatcagcttct
aatgacttcaccatccgtgtttggtttttaccttcaggtaatccagtttctgttttgcgt
ggtcacactgcttcggttactgcaatagccttcagtcctcggcaaggctgtgagcatctt
ctcctttcgtcttctgatgacggaacgtgtcgcatatgggatgcgtcagattcatctctg
cattccagggtttacatgcccaaccctaaagatgtcgcttcagctccaaggcctactatt
cctgctcctccatcaactgtccctggatgcaatcaaattctttgctgtgcctttaacgct
gatggcagtatttttgtcacagggagctccgacaaaatagctagggtttgggatgcatgt
aaatggaatgatgatgttaccggacgacccaactatgagatggacaccctgaaaggtcat
gaaaacgacgtaaattatgttcagttcagtgggtgtgcagctccacgaaagccattggtt
ggtgacagcatgaaggatgagcatgcaacgcgcttcagaaattcttggttttcacatgat
agcattgttacttgctccagggatggcactgccatcatctggatgcatcacttttccaaa
tcatatgccaaagtaggacgatggcagaaggcttaccacctacgggtccctcctccccca
atgcctccccagccgcctagggggaatggacccaggcaacggcttctacctactcctcga
ggagttaacatgatagtgtggagtctggataatcgctttgtccttgcagccatcatggat
cacaggatatgtgtttggaatgcgtcggatggtagtctggttcattcacttactggacac
gataaacagacctatgtactcgatgttcatcccatcaacccaagaattgccatgagtgct
ggctatgatggacgagttatcatctgggacatatgggaaggacgccccattaaagtttat
gaaactggggagtataatctagtggatggcaacttttctcccgacggcacatctctagtg
gtgtccgatgaagttggccagatttacctttttggcacagggtcaaagatgtccgagaag
gacgtcaaatatgatcagttttttcttggtgatttccgtcctctggtgcgcgacgttcat
ggcaatgtcttggatgtggaaactcagcaaccacctcatctgcgtaatttacgcgatttg
ctttgtgatgctggcatgattccttactgcgacccgtaccaaaccattttccagcagcgc
cggcttgctaacctcggtctggagtggcacccacctgttatgcagctttcaatcggaact
aatgatgatgttacatatttcccgccggagcaacctatggctttccagccaccggttgct
ccttcacctgaaagacatgatttaccggtcccaacagatgccggtaggaacagatgggta
gagcagccccctgaggtagaagaaccaatggattgggaacaagatgctgcagtgcatagt
gaagacactggatcggattatagtgcaagtgaagaaagtgtgagcgatgaaaaagaagga
gaaggttatgagagtttgagcgaaggagaatcaaatagtgaggaggaatcggaggctcca
atgcacttgcggcgttcggggaggaacaagcgaaagaaaatggagtctggacgtagttca
agtaggcgagtaaggggaagaacttctgccgactatgacaccagaaagcgccgtcagcaa
cggggtcgccgtttgaaggcatctagaaatagttcatacagagctagtagagcagttgtt
gtcagtgatcaggagcatgtctctaccagaccgcaacggcaggctgctcgtaatgcactc
aacttatttagttctattcaaactccaggccgcgaagaagacgaggacagtgctgagcac
ggagagaaatcagaagcggtcgataatggacaagaacatggagaaccatcctctatggca
gctgcagaccttgagggggagatacggtcccttagaagaaatcctcgagaagaagttgaa
gaggagagtgagcagcgtgtccacgcttcaacctcgcaacctgaggttgataaccttggt
gattgtaggcgtcccagatcgcagagacctagaagaataaaaatcatattcaatcgtcca
gctggcccggcacatggttcttcacagtttgatgggcttagagagggtgaagcaaacgct
ttgcatccgtcagacgatatagccatctcggtcagtcctagccgcgagaatattccacca
gagcagattcaaaagtcccataggaaattgatcatcaagcctccgaaacccattagtcaa
gagggtggaagtagcgatgaagacggagacacaataggagggcaagggatgaatgttcca
gctttagctcaagagtcgccaattcgaagtcctgatatcgcacactcaacatcggaagga
attgttggacaggagaatcattggcagtggaagaggggtaaggagatcaacggtgctttg
ggtagtggttcttccaagcatggagagcccagtaaagacaatgagagtctggaatccttc
gagcgtgcaattctttcaaacgaatgtgcccaaacgcacacatgggaacagcctcaacat
cctgacaattcaagatcagaagacgctaatgttagaaatgagtcgcacaattccgagcgt
gaaagaactcagaataatgcgaatgtttctaatgactatggagcacatgaagacaaccta
tcttctgtgcatgaattggcagacactctttcgcagaaggttgatttgaacaaggatccg
gataccgaagagcgccgttctaaagacacggaaagagaattaagaagtgaacagaatgca
aatcagtctttgatggagaatactttcagtgatagaagtcccgtttcatcagaggctgga
gggacatcaagattgcagtctacatcaaaagtcgagacggagaacaaataccaattgcaa
gaaatgccagcaagctctagggaaattgaagacggtgattatgctgacgatgtagacgag
ggtcaagagagggcgggacacatgcaagacagtgagcaacacctaattgagaccggtggc
actgatcatgaaacaagagagtacagcgacgaagactccaatgctggaaggaacggtgtc
ctcaataacgaccgaacaataaacacctctgtgagtctcgaagaacgtcagcaccagctt
gacactgatgaggctgagacgaggagggatcatttatgcgatgacaatgaggatgtcatt
ggatatgagactggacaggatcatccagaaggaagtacagagaagcaagcgtcggaatca
gaaatggacgagtatgaatacgctggacaagaggaaaatgagagcaaagaattcgaggac
acaccccggagttttaaaaatcgatcccgtcgacagaataagtatgaaagcacggagggc
aggagtcgaagtgcagaacgcaaacggcacaaacctctatctgagctaaactctggtcat
ggtcattcactactttctgatgaggcgccatctccagccaaaaggtcaactcgtcatgtg
cgaacggcacctgagggaaatgggcgaaggacacagccatggttgcgtgagcaccaagaa
gctgaagaactggcaggtccttcgcgatcagtttcacatacacaagtgcgagggaagagt
aaacgacaacctagtaataagctgcacgacatggtttgggaaagcgaaccccgtaacaac
ggtgtatctcatggtcgacaaggcctccgttcagatgctagtcccagtggaagtaagatt
gacaggcctctaaggctcaagttgaaatgcactgaaaactcagcaaagaggaatgaaggg
ttgcctgatgaggatgatgacaatggggagaatcagacgcgagtgtcagctcgtagcact
cgaagacaaattagcttacagaaagagagggcaaaggttgttgaagtcaaggttggtgtg
acaaattctattccacgctcaagttggcgtgcccctagaaacaatcttcggaagatcgaa
agtgcctcgtggttgttgacgtcagaggtggaacaaggtcactacactccacaatttggt
gatgaggtcgcttacttgcaccaggggcatagagaatatctcgaagcatcgaaggtcaaa
gaaaaaggtccctggaagaagcatgaacttcgcgcagtagaattttgtcgcattacaaat
ctagaataccacattgaacctggaggtgggacaagctgcaagctagagcttgaattttta
gatatggaatcttctgctagtggctacaagttccagctaacatggccggaattgactgat
tatccggactttttagtggagaaaagtcgttttgatgcgtccatggcaaaagggtgggtt
gctagggaccattgtaaagtatggtgggcgagtgaaaagggggcagatgagaagggccaa
tggtgggatggtcgaattaagactatcaaggccaagtctgatgatttcccagatagtccg
tgggaaaaatacattgtcacctacagagaatctgcagagccacaggcgcacagtccttgg
gagctttttgacagaaattgcaatattccagggtggactgtgccgcaaattgaggaagac
gaaagagacgaactattgcaatatatttacgacattgaggaggctatgttagaggatgag
acggatggatttggtgtaaaacaactggaatcattagcaaagcatgactcaaacttcttg
aacagggtgcctgtgccgcttaccttggagctcatacgagagaggttgtcaaagaacttt
tatcgtagcaaagacgccgtagaatacgacattcggttactagctacaaatgctgaactt
ttctttggagacgaagatgattttaccggaaagatgaaccggctggccagtgaactcttg
gaaatcttgcaatga
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integrated database retrieval system
