Physcomitrium patens (spreading earthmoss): 112295184
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Entry
112295184 CDS
T01041
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic
KO
K02945
small subunit ribosomal protein S1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
112295184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ppp03011
]
112295184
Ribosome [BR:
ppp03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
112295184
Bacteria
112295184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
112295184
NCBI-ProteinID:
XP_024402185
UniProt:
A0A2K1J0W6
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Position
18:complement(9496805..9501115)
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AA seq
549 aa
AA seq
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MSGRVCIQQRQGLVFCPRGGITPSRALQAPGALLFHQPSKRFSRRGLTVSRPKFRLHKAR
TSKWFAEYTDSRDSSQDVRSGGVDLDLVHGDGAASNSAYPKSREIRDGEHTSVNRIFVDS
SASRLNGHANGHVLEESYSFGEHHFSKIIEGDVITKSDSRGKRKMQKQNLSEEVDETLSR
ASDSQVSLTDVEYYVPICGHRVTGVVVSGNYAKLDMDIGAAKLGQMHVQEILPLDKFQID
QTSWILADDAGEGGGAGLPPNGHTHVLYDEEVFTYEAPESPLLVDIGTVLDMEVVGITTS
GRALLSARKAAQRIEWNRIMQIKEEDEPFEITITGFNKAGLLARVEGLRAFLPHAELVNQ
PDISKGENYEPYVGSTLWVSIAFAKEIEGNLVLSEKIAWIKRRLQVGSLHDGIVAQLYPY
GALVKVNETGTIWGMIHISNISNARIDKISNVFEIGEQIKMIVVNCPIPDKFSFSTALLE
SEPGLMLRDKQRVFREAEERAITLQNEHPKWKQPPDDIAENSSTGTTSKPIANLKWLEFV
KEETPLSQL
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgagtttgcatccagcagcggcagggccttgtcttctgccctcgcggcgga
attaccccttccagagcattgcaagctcctggtgcactcctatttcaccagccgtccaaa
aggtttagtcgtaggggattgacggttagtagaccgaagtttagactccacaaggcgcga
acatcaaagtggtttgctgagtatacggactctcgggatagttctcaggatgttcgaagt
ggtggcgtagacttagatttggttcacggcgatggcgcagcatcaaacagcgcgtatcca
aagtcgagagaaataagggatggggagcacacttctgtcaacagaatctttgtagattca
agtgcgagtcgcttgaacggccatgcgaatggacacgttctagaagagagctactctttt
ggggaacatcactttagcaagataattgaaggagatgtgattacaaagagtgattccaga
gggaaaagaaagatgcagaagcaaaatctgtctgaagaggttgacgagacacttagtagg
gcatcggattctcaagtaagcttgactgacgttgagtattacgtccctatatgcggtcat
cgcgtaactggggtggttgtatctggtaactatgcgaaactagatatggatatcggggct
gctaagctcggacagatgcatgtgcaagagatacttccgctcgacaaatttcaaattgat
caaaccagttggatccttgctgacgacgctggtgaaggaggcggtgccggtttacccccc
aatggtcacacccatgttttgtatgatgaggaggtcttcacatatgaagcccctgagtcc
ccacttcttgttgatattggaaccgtgcttgatatggaggtggtggggatcacaacgagt
ggcagggctcttttgtccgcccgcaaagctgctcaacgcattgaatggaaccgaatcatg
cagatcaaagaagaggatgaacctttcgaaattacgattactggattcaataaagcggga
ctcttggctagagtcgagggactacgtgcatttttgcctcatgctgaactagttaatcag
cctgatatttcaaagggcgaaaattacgaaccatatgtgggcagtaccttatgggtgtca
attgcttttgcaaaggaaatcgaaggaaatcttgttctgagtgagaaaatcgcttggatc
aaacggagactccaggttgggtcccttcacgatggcattgtagcccaactgtacccatat
ggtgctctcgtgaaggtcaatgaaacgggcactatatggggaatgatacatataagtaac
atctcaaatgcacggattgataaaatatcgaacgtgtttgaaattggagagcaaataaaa
atgattgtggtgaattgtcctattccagacaaattttccttcagtactgctctcctcgaa
agtgagcccgggcttatgcttcgcgataagcagagagttttcagagaagctgaggagagg
gcaataacgcttcagaatgagcatccaaaatggaaacaaccaccagatgatattgcagaa
aattcaagcactgggaccacttcaaaacccattgcaaatttgaagtggctagaatttgtc
aaagaggaaacgcctttgtcacagttataa
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