KEGG   Physcomitrium patens (spreading earthmoss): 112295436
Entry
112295436         CDS       T01041                                 
Name
(RefSeq) probable splicing factor 3A subunit 1 isoform X2
  KO
K12825  splicing factor 3A subunit 1
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112295436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ppp03041]
    112295436
Spliceosome [BR:ppp03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    112295436
 Complex B
    112295436
 Complex C
   U2 SnRNP specific factors
    112295436
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 112295436
NCBI-ProteinID: XP_024402802
UniProt: A9RE34
LinkDB
Position
18:complement(8500190..8503721)
AA seq 793 aa
MPGIGEVLALPAPPEGGLGVLPEAQLPADVNMKEAPVAHKAPQMVATQTKTIGMIHPPPD
IRSIVDKTAQFVAKNGPEFEKRILANEKNNVKFNFLNALDPYHAYYQHRVSEFKAQLAAP
AVAGPMNVSVNEEAEAKPPQEQADVDAIKVGAVKPPGKVLEPPEPDAYTVHVPELATTLD
VDIIKLTAQYVARNGKSFLTGLTSREHSNPQFYFLKPTHSMFTFFTALADAYSKVLVPPK
GLVDKLRKDVGSKTGILERCLNRLEWERSQAAARQKAEDEIEQERMQMALIDWHDFVVVE
TIEFAEDEDGELPQPMTLEEVIARSKLTPADEEEVEATEEGKEMEMDMDEEELQLVEEGM
KTTTISEGKDPAYDQADEEEDVPMRIVTNWKRPEERVAAEKDVLKVVVSPITGELIPVNE
MAEHMRISLIDPKYKEQKERMMAKLRETTLATDDEISRNIVGLARTRPDIFGTTEEEVSN
AVMAEIEIKKDEPKQVIWDGHTGSIGRTASQALAQTMTSDEQIAAINREKANLTPDGRPL
PGPSVPPVPRLAPTPARPPMPPPGLALNIPRPPNLAGQISSGSQSLQPPPRPAMVLPAPP
VRPAPAPPTLPTPAVMLVRPPPPAPHMLIPPVGSAPNQYTPLPPPPPRPYLPPVALPPPP
PQLGMPPPPPDEAPPPPPEEPEPKRQKLDEILLLPEDQFLAQHPGAVRIRVSVPMVEGES
NFRGQTLELTVLSLSESIKSLKERIAGEVQLPANKQKLSSQAGFLKDNLSLAYYNIGPGD
ILTLGLKERGGRR
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgccaggaataggcgaggtactggctctgccagcgcctcccgagggcgggctgggagtg
ttgccggaggcacagctacctgctgatgtcaatatgaaagaagcgccagtggcgcacaag
gcgccgcagatggtagctacgcagacgaagacgattggtatgatccaccctcctcccgat
attcgtagtattgtggacaagacggcgcagttcgttgccaagaacggccctgaatttgag
aagagaattcttgcgaacgagaagaacaatgtgaagtttaattttttgaatgctctggat
ccatatcatgcatattatcagcatagagtttcggaatttaaggcgcagctcgctgcacct
gccgttgctgggccgatgaatgtgtcggtgaatgaagaagctgaagccaaacctccacag
gaacaagcagatgttgatgcaataaaagtgggtgccgttaaaccccctgggaaagtattg
gagcctccggaaccagatgcgtatacagtgcatgtgcctgaactggctacaaccttagat
gtggatattattaagttaacagcccagtatgtcgcacgaaatgggaaaagttttctcaca
gggttgacgagcagggagcattcgaatccccagttttactttttgaagcctactcacagc
atgttcactttcttcacggcgttggccgatgcttattcgaaggttttggtgcctccgaag
ggcctggtggacaagctgagaaaggacgtggggagtaaaacgggtattttagagcgttgt
ttgaataggttggaatgggagagatctcaggctgcagcgcggcagaaagcggaagatgaa
attgagcaagagaggatgcaaatggctttgatagattggcatgactttgtggttgtggag
acaatcgaattcgctgaagacgaagacggtgaattgccgcaacctatgactctggaagag
gtaattgccagaagcaagttgacgcccgcggatgaggaggaagtggaggcgaccgaagaa
ggcaaagaaatggagatggacatggacgaagaggagctgcaattagtggaggagggtatg
aaaactacgacgatttcagagggcaaggatccagcttatgatcaagcagatgaggaagag
gacgtacccatgagaattgtgacgaactggaaacgacccgaggagcgggtggcagcagag
aaggatgtcttgaaggtggttgtgtccccgatcacaggtgagttgatacctgtgaatgag
atggcggagcacatgcgcatctcgcttatcgatcccaagtacaaggaacagaaggagcgc
atgatggcgaaattgcgggagactacactggctacagacgacgagatttcacggaatatt
gtggggttagcacgcactcgaccggacattttcgggacaactgaagaggaagtatccaac
gcggtgatggcagagatagagataaaaaaagacgagccaaaacaagttatatgggatggt
catacgggtagcattggtcgcacagcttctcaagctctggctcaaacgatgacgagcgat
gagcaaatagctgccataaatagagagaaagccaatctgactcctgatggaagacctctt
cctggaccttctgtaccccccgtcccaaggttagctcccacaccagcacgtccacctatg
cctcctccaggtctggcattaaatatacctcggcctcccaatctagcagggcagatttcg
agcggatcccaatcactccagccccctcctcgaccagcaatggttcttcctgcacctcct
gtgaggcctgcacccgctcctcctactcttcccaccccagctgtgatgcttgttcgtcct
ccccctcctgctcctcatatgttgatcccccctgtaggttctgcacctaatcagtatact
ccattgcctccaccacctccaaggccatatctcccacctgtggcattgccacccccgcca
cctcagttgggtatgcctcctcctccccctgatgaagctccaccgccacctccagaagag
cccgaaccgaagaggcaaaaacttgatgaaattcttcttctgccggaggaccagtttctt
gctcaacatccgggtgctgtacgaatccgtgtttcagttccaatggttgaaggcgagtct
aatttcagaggccagaccttggagctgacggtgttatctttgtcggaatcgatcaaaagt
ctcaaagagagaattgcaggggaggttcaactgccagctaacaaacagaagttgagcagt
caagctgggtttttaaaagacaatctctctcttgcttattacaatattggtcctggagat
atcctaaccctgggtctcaaggagcgtggtggtagaaggtaa

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