Physcomitrium patens (spreading earthmoss): 112295494
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Entry
112295494 CDS
T01041
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ppp01001
]
112295494
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112295494
Enzymes [BR:
ppp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
112295494
Protein kinases [BR:
ppp01001
]
Serine/threonine kinases: Other
Other
112295494
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112295494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
LisH
Motif
Other DBs
NCBI-GeneID:
112295494
NCBI-ProteinID:
XP_024402964
UniProt:
A0A7I4D6G2
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All DBs
Position
2:16716415..16727682
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AA seq
1989 aa
AA seq
DB search
MFCGEECGRDSGACKICGVRVGLLDFVELCSDCGWAFSGAGRVCWWSVIGYEQYTGHPYS
NNSRSSHLIGRLVNLFREDDDFFELLSKRLLVGPVHSTMVRAAAVRLLLACVSSWLYPHV
FEEEVLVNIKRWVTEDSPKDIANSRASRSKRTKDADAVHREMLRTYSTGLLAVTLGGSDV
VEDVLTTGMVGQLMHYLRVRVLGDASAEANTESKTNIGMSGSRGRDEARGRVRPLLDVSR
MEDLRVSDKVSDEQRTERGGEMLVDAIGEKKDNEEAVQEDAENLEGTPDLSLCTYDADED
GDECMNEDKRRRKDRREAKTRTAEWLNSTRPLQEDENEEMSRAEPSKRRIDVHRVGGKGR
GKGRHSDGAAESERGQSLAPTSAPTSARKESGHKSRGLSSEKTSKLTGIGSEAPRGGVKD
DSDSENQTIQCVLVGKADISLSMRKAMRAAQAEARTENAPWEAVKAAGDAAADLVRAAAT
EVLATTDKEEDILAAANEAALTVVDAALSSTVTREQLEKKKMAMEEAKKVAEIESKKEQE
NEVGDEGQSGVDMEALAALRERYCVQCLEKMGEYLEVLGPVLHERGVDVCLALLQRRPID
NNYKDLAVLSDVLKLICALAAHRKFAALFVDRGGVEQLLATPRVSQTLTGISLCLFALAS
LQGVMERVCTLPAPVVQDVVALALHLLSCPQDPARRNAALFFGASFVFRAILEAFDGQDG
LRKIVNLLRNTASLRSGGSSNSGTAATSAGSRDRTLASAEVLTSSGKQIAYLTCVALRQY
FRAHLLLLVDSLRPSRGHKGGSRNGPNGKATYKPLDISNEAMDTIIVQLQRDRKLGPAFV
RSRWPPLDAFMQYNGHIVLLELTQQAAPGERYLHEIVQHSLGVLQIVTLVPYTRRLIIDS
TLSNERSFMAVVLDAVSGVAFCDPEVIQTALLVLANLVCPPPSLCSRPMAAAATPAQSQQ
AQSSQGGAGSSSQATTVGTGTAVNLESKGWTGRAESNVDRNGGAQGASGPSAFGAGVVGD
RRISLGPGAGGSGLAAYMEQGYRYAREAVRANNGIKVLLHLLYPRTVLPPPALDCIRALS
CRVLLGLARDDTIAHILTKLQVGKLLSELLRDGGSQAGRQASAGGIGGEQGRWQAELSRV
ALELIAIVTNVGRANTAAASEAAAPTLRRIERAAIAAATPISYHPRELLQLIHEHLIGSG
LPSAAAALLKEANLKPLPSLLPPTSLVLPASSTEVVKNVMQWPAGRVNGGFLGGGSKKPA
KDEDDASSSQSLPSSRKKPAFSTSLTSGGKSGSAIASLRKSQSVKENRSRLDTQDYFLSQ
GKPRDDTDSIFKTPGAYRNLPVSGKRKSGERDMPPLSPTSKRMAFTDPFMASPCVTPGHA
PLKTNFVDVSAPVQSTPAPSTSDFTPAKSFFGQYGLPEKVDTANLQTDSSTFDFQHSPYV
PFKQYLNTPGYSLVPSTGGLLEPRTNTTEHATLDSLVVQYLKHQHRQCPAPITTLPPLSL
LHPHVCPEPSRALDAPLNTASRLAVRQISPPYGGMHGRRRDRHFVYSRFRPWRTCRDDAV
LLTANTFLGHASCLAIGSLAGDIRLFDSSSGNILEVQLMGHNSPITALQSAPHCLAGNDT
RVGQLLLSSASHDVRLWDSSNLGNGPLHAFDSCKAARFNHAGSRLGAITCESPHKAVLLY
DVGSYRLEQRLSDSSISQSGLPRSHTQSIVHFSPDDVLVLWSGVLWDPRVQRAIHRFDQF
TDYGGGGFHPAGNEVIINSEVWDLRSYKLLRSVPSLDQTAITFNTTGDVIYATLRRNSDD
IMTALNPRRMRHPLFSAFRTMDAVDYSDITTTIVDRCVLDLATEPTDSFISIVAVESNDE
MDSFARLYEVGRRRPTDDDSDPDDGGETEEEEDDEDDDDDDGDLHEDDDIDLISNDNDEN
SEEDDGDEAGDNDSISTDDDFSDDGLGEGDLELISDGDDGPRGTFSSDDGSGGEFGQDAF
DEFMGGFLS
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atgttttgcggggaggagtgtggtcgtgattctggagcttgtaagatttgtggagtgaga
gtagggttgctggatttcgtggagctgtgtagtgattgtggttgggcgttctctggtgcg
gggagagtttgttggtggagtgtaattgggtatgaacagtatacagggcacccctattcc
aacaattcacggtcttcacacttgatagggcgccttgttaacttattcagggaggatgat
gatttttttgagctgctgtccaaaagactgttggttgggccagtgcattctacgatggtt
cgtgcagctgcagttaggctgttgcttgcctgcgtttcgagctggctgtatcctcatgtg
tttgaagaagaagtccttgttaatatcaaacggtgggtaacggaggactcaccgaaagat
atagcgaacagcagggcatctagaagtaagaggaccaaggatgctgatgcagtccatcgt
gagatgttgaggacctattcaaccggccttctcgcagtaactctgggagggtctgatgtt
gtggaggatgtacttacgacgggtatggtaggtcagcttatgcactacctgcgcgttcgt
gtactgggagatgcgtctgcagaagcgaataccgaaagtaagacaaatataggaatgagt
ggaagcaggggaagggatgaagctagagggcgagttaggccacttctagatgtatcaagg
atggaagatcttcgtgtttctgacaaagtatccgatgagcaaagaacagaaaggggtggt
gaaatgttggttgatgctataggagagaagaaagataacgaggaagctgtccaggaggat
gctgagaacttagaaggaactccagacctgagtctctgtacatatgatgccgatgaagat
ggggacgagtgtatgaacgaagataaaaggcgtagaaaagataggcgagaagctaaaact
aggacagcagagtggttgaatagtactcgtccactgcaagaagatgaaaatgaagagatg
agtagagcagagccgtcaaaacgcaggattgacgtccacagagtaggcggaaaaggaaga
ggaaaaggaagacatagtgatggcgctgcagaatctgaaagaggccaatcattagctcca
acatcagctccaacatcagctcgcaaagaaagtggtcacaagagcaggggattatcctca
gagaaaacttctaaattgacaggaattgggtctgaggctccgaggggtggagttaaggat
gacagtgattcggagaaccaaacaattcagtgcgtcttggttggtaaggcggatatctca
ctgtccatgcgaaaggccatgcgagcagctcaagccgaagcgaggacagaaaatgctccc
tgggaagctgtaaaagcagccggagatgctgctgctgaccttgttagagcagctgccaca
gaggttctcgcaaccacagacaaagaggaagatatattggcagcagcaaatgaagcagct
cttacagttgtggatgctgctctttcatccactgtcacaagagaacagctggaaaagaaa
aagatggccatggaagaagctaaaaaagtagcagaaatcgagtctaagaaagaacaggaa
aatgaagtgggagatgaagggcaaagtggtgtggatatggaggcattagctgcacttagg
gaacgttattgcgtacagtgtcttgaaaagatgggggagtatttggaagtgttgggtccc
gttttgcatgaaagaggtgtcgacgtttgcttggccctacttcaacggcggccaatcgat
aataactacaaagacttggcagtgctttcagatgtactgaaattgatatgcgcacttgct
gcacatcgaaagtttgctgctctttttgtggatcgaggtggtgtagagcagcttcttgct
actcctagagtgtctcaaactcttacgggcatctctctttgtctgttcgcacttgcatcg
ctgcagggcgtgatggagcgagtctgtactttgccagcaccagtggttcaggatgttgtt
gctctcgcacttcatcttttatcttgtccacaggatccagctaggcgcaatgctgctttg
ttttttggagcgtcttttgttttccgagcaattttggaggccttcgatggtcaagatggg
ttgcgtaaaatagtcaatttgttgcggaatacagcttctttgagatcaggagggtcaagc
aactcaggcactgctgcaacatcagcaggttcacgtgatcggacgttggcatcggctgaa
gttttgacatcaagtgggaagcagattgcttatcttacgtgtgttgcactacggcaatat
tttcgggcccatttgctattgttggttgactctttaagacctagtagaggtcacaagggt
ggttcacgaaacgggcccaacgggaaagccacatacaaacctcttgacatcagcaatgaa
gcaatggacacaattattgtccaactgcaaagagatcgaaaattaggacctgcttttgtc
aggtcgcgttggcctccacttgatgcatttatgcagtacaatggtcacattgttctccta
gaacttacccagcaagcagcacctggagaaaggtacttgcatgagatagtgcagcattct
cttggagttctgcaaattgtgacgttagtgccttacacacgacgattgattattgactct
acgctaagcaacgaacgatcttttatggctgttgttctcgatgcggttagtggagttgct
ttttgtgatcctgaggtgattcaaacagctcttcttgtattggccaatctggtttgtcct
cctccttcgctttgcagtcggcccatggcagctgctgccactcccgcacagtctcaacag
gcccaatcaagtcaaggtggagctgggagttcttctcaagcaacaactgtgggtacaggc
acagcagtgaatctagaaagtaagggttggactggtagagcagaaagcaacgttgacaga
aatggaggagcccaaggggcttcaggtccaagcgcttttggggcgggggttgtcggagat
cggcgaatttccctggggccaggtgctggtggttccggcttggcagcgtacatggaacag
ggttatcgttatgcccgtgaagcagtacgggcaaacaatggaatcaaagtgttgcttcat
ctgctttacccgaggactgttcttccccctcctgccttggattgtatacgagccctttcc
tgtcgagttttattgggcttggctcgagatgacaccattgcgcatattcttaccaaatta
caggtagggaagttactctcagagttattgcgagatggtggtagtcaggctggccgtcaa
gctagtgcaggtggtattggtggggagcaagggaggtggcaagcggaacttagcagagtg
gctctggagctcattgcgattgttaccaacgtggggcgtgcaaatactgcagcagctagt
gaagcagcagcacctactctacgacgaattgaaagagcagccattgctgcagccacacct
ataagttatcaccccagggagttgttacagcttattcatgagcatctaattggatcagga
ctcccgagtgcagctgctgcattgctcaaagaagcaaatttgaaacctttaccttctctt
ttacctccgacttctcttgtactcccagcttcatcgactgaagtagtcaaaaacgttatg
cagtggcctgctggacgagttaacggcggatttcttggaggcggttcgaagaaacctgcc
aaggatgaggatgatgcgagcagttctcaatctcttccttcttcccgcaaaaagccagca
ttctcaacttctttgacatctggtgggaagtcgggttcagctatagcttcgctgagaaag
tctcagagcgtgaaagaaaaccgcagtcgacttgatacccaggattatttcctcagccaa
gggaagcccagagatgatacagatagcattttcaaaacacctggagcatatcgcaatcta
cctgtctccggcaagcgtaaaagcggtgaaagggacatgcctccattatccccaacaagt
aagcggatggcttttacagatcctttcatggcatcaccttgtgttactcctggccatgca
cccttgaagacaaattttgttgacgtttccgcacctgttcaatctaccccagctccctca
actagtgatttcactcctgccaaatcattttttggacagtacggtttgcctgagaaagta
gatacggcaaacttgcaaactgactcatcgacttttgattttcagcattcaccctacgtt
ccttttaaacaatatctcaataccccgggctattcccttgtcccatcaacaggtggtctg
ttagaacctcgcaccaatactacggaacatgcaacacttgactcacttgtggtccagtat
ctgaaacaccaacatcgtcagtgtccggctcccattactacccttcctcctctatccctt
cttcacccacatgtttgcccagaacctagtagggcacttgatgctcctttaaataccgct
tcaaggctagctgtgcgccagattagtccaccttatggaggtatgcatggacgaagacga
gatcggcactttgtatacagccggtttcgtccctggcgcacatgccgtgatgatgcagtt
cttcttactgctaacaccttcctaggtcatgcgtcctgtcttgctattggtagtcttgct
ggagatattcgactattcgattcaagttcaggaaacatcttggaggtgcaattgatggga
cacaactcaccaatcacggctttgcaatctgctccacattgtctggctggaaacgacaca
cgagtggggcagttactgttgtcttctgccagccatgatgttcgattgtgggactcctcc
aatcttggcaatgggcctttgcacgcttttgatagctgcaaagcagcaagatttaaccat
gcaggaagtagacttggcgctatcacttgtgagtcccctcacaaagcagtcctgctgtac
gatgttggctcttacaggttggagcaaaggttgtctgacagttcaataagtcagtcaggc
ttgccacgcagccatacgcaatcaattgtccactttagtcctgacgatgtcttggtcctt
tggagtggagtattgtgggatccccgagtccaacgtgcaattcatagatttgaccagttc
actgactacggtggaggtggcttccatcctgccggaaatgaggtcatcatcaattcagaa
gtctgggatttacgttcgtataagcttctgagaagtgtaccatctctggaccaaactgcc
ataactttcaatacaacgggcgatgtcatctatgcaacactacgtcgtaactcagatgac
atcatgaccgcacttaatccacgtaggatgcggcaccctttattcagtgctttcagaact
atggatgcagtggactactctgacatcactactacaattgtggaccgttgtgtccttgac
cttgcgaccgaacccacagactctttcatctcaatagtagcagttgaaagtaacgacgaa
atggattcattcgctaggctgtatgaagtagggaggaggcgtcccactgatgatgattca
gacccggatgatgggggagagacagaggaggaagaagatgatgaggatgatgacgatgac
gacggtgaccttcacgaagacgacgacatcgatctcataagtaacgacaatgatgagaac
agtgaagaagatgatggggacgaagctggggacaacgatagtatttctacggatgacgat
ttcagtgacgatggtcttggggagggggacttggaacttatctccgacggtgacgatggt
cctaggggtacgttttcaagtgacgatggctccgggggcgagttcggacaagatgcattt
gatgaatttatgggaggatttctctcataa
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integrated database retrieval system
