Physcomitrium patens (spreading earthmoss): 112295548
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Entry
112295548 CDS
T01041
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY2 isoform X1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112295548
Enzymes [BR:
ppp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112295548
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112295548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-C3HC4_3
PHD_NSD
DUF2921
zf-ANAPC11
zf-RING_16
zf-RING_UBOX
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
112295548
NCBI-ProteinID:
XP_024403073
UniProt:
A0A7I4BIP2
LinkDB
All DBs
Position
18:6288074..6294306
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AA seq
645 aa
AA seq
DB search
MRLLRGPAVDEVGKFGRRASKPRAEAMLSRDGTEPVVTEQVEASSVRRPEVQRDEAGRNC
GINRAIVITLWITTIYLLPGVATGYRPLKEKVLSFEESSWHERLFAEGSGVQLGPYSVLN
ISGTYKGTWSLRSGNYASKFPVFQKTSGNIVFELTSSATDISGVHFVQGEVVLRDGVYIS
DGDLQMKMEGVYVWPFRQLRMVLSSAVDSEMNRGDDFIQSSPYHLLGMFSSQVAQDTPRN
YVRHNKKNSNIMEMGRTCKIQLITQISTSVSDHKYGEHERQVCEMQGLVEGPSMGDEQGE
CFSPLVVNATSVNVALYYNKAVNYTLMVTFISFLQVLFLIRQMEHSNTQSGAAKVSLMMI
GQQAIMDAYLCLLHLTAGILVGRGSYTIAAWKRREEINQEESLFNAFATAAFFKFVIFSI
FEMRYLLAIWKSRRPVSSGEGWETMRRELSVLYSRFYGFLLGGILIMYELHNMLRYIVFF
FYSFWIPQIVANVVRDSRKSLHPHYIVGITVTRLAIPLYVFGCPNNFIRIEANVRWCVGL
TTFLGAQAAILLLQHYCGARCFIPRQLLPEKYSYFRRVDRVNEQLGGEENAPIDCVICMA
AVDVSQRCNDCMVTPCDHFFHTGCLQRWMDIKMECPTCRRPLPPI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttttacgggggccagcggttgacgaggtgggaaaatttggacggagagcaagc
aagcctagggctgaagctatgctctcaagggatggaacagaaccggttgtcaccgagcag
gtggaggcctcatcggtacggaggccggaggttcagcgggatgaggctgggcggaattgt
ggtataaacagagcaattgttataactctgtggatcaccactatatatttgttgccagga
gtagccactggttatcgacctctgaaggagaaggtgcttagctttgaagaatcctcatgg
catgagcgtctttttgcggaaggaagtggagtgcagttggggccgtactcggtgttgaac
atctcaggaacctacaaagggacatggtcacttcgcagcggcaattatgcgtccaagttt
cccgtgtttcaaaaaacgagtggaaatatagtttttgaacttacaagctcagcaactgac
atttctggtgtacactttgtacagggagaagtagtgctgcgcgacggtgtgtacataagc
gatggcgatctgcaaatgaaaatggagggtgtgtatgtgtggcccttccgccaacttcgc
atggtcttgagcagtgcggtggacagtgagatgaatcgcggcgacgattttattcaatcc
agtccctaccacttgctcggcatgttctcatcgcaggtggcacaagatactcctcggaat
tatgttcgtcacaataaaaagaactcaaatataatggagatgggaaggacatgcaagatt
cagctgatcactcaaatatctaccagtgtatcagatcataaatatggggaacatgaacgt
caggtttgtgaaatgcaagggttagtggaaggtcccagtatgggcgacgagcaaggcgaa
tgtttctcacctcttgtcgtaaatgctacgtcagtgaacgtggctttgtattataacaaa
gccgtcaattatacgttgatggtcacttttatttcctttctgcaggttcttttcttgata
cgtcaaatggaacacagcaacacacagtcgggtgccgctaaggtatctttgatgatgata
ggacagcaagccatcatggatgcttatctgtgcctcttgcaccttacagcgggtattctt
gtaggtcggggctcatatactatagcagcgtggaagcgcagggaagagatcaatcaagaa
gagtcgctgttcaacgcatttgcaactgccgcattcttcaagtttgttatattttcaatc
tttgaaatgcggtacttgcttgccatttggaaatcacgaaggcctgttagttctggagaa
gggtgggagactatgcgtcgcgagctttcagttctctattcccgtttctatggatttctg
ctgggcggcatactgattatgtacgagcttcacaacatgcttcgctatattgttttcttt
ttttactccttttggatcccccaaattgtggccaatgtggttcgtgattctcgaaaatca
ctccacccgcattacattgtgggcatcaccgtgacacgcttggcgattcccctgtacgtc
tttggctgtccaaacaacttcatccgtatcgaagccaacgtcagatggtgtgttggactt
actacattcttgggcgctcaagcagctattcttctcctccaacactactgcggagcccgg
tgtttcatccctcgtcagctgctgcctgagaagtacagctacttccgcagggtggaccgt
gttaatgaacagttaggaggagaggagaatgcgcctattgactgcgtgatttgcatggct
gccgttgatgtttcacagcggtgtaatgattgcatggtgaccccatgcgaccattttttc
catactggctgcttacaaaggtggatggacatcaaaatggaatgtccaacatgccggcgg
ccgcttcctcctatttag
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