Physcomitrium patens (spreading earthmoss): 112295584
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Entry
112295584 CDS
T01041
Name
(RefSeq) multisubstrate pseudouridine synthase 7
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppp03016
]
112295584
Enzymes [BR:
ppp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
112295584
Transfer RNA biogenesis [BR:
ppp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112295584
Prokaryotic type
112295584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-GeneID:
112295584
NCBI-ProteinID:
XP_024403124
UniProt:
A0A2K1J0E2
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Position
18:6045862..6053175
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AA seq
764 aa
AA seq
DB search
MQIFVGVASFAVRALHLHDHRNCFFKILQQGYAVRALGVQGKRGSITGSVLLEEETSVTV
EALQILKNWRTKRAVFEMSTEENVGILSYANSLPGFRGILKQRFSDFIVNEVDLEGNVIH
LSDLEAPLEERAKVVKVSEEGVADDEEEVNGEKQPKPLSDDYAADVLAFKEIAGESNAKV
LEGLLVQIANSNDPVPPVLLAPDDDKNHRGMIHTFFKSRLTFITSDTVDGASATDKCIRL
RHQPRNQGGGNRFQKRGREHGGRGRGWGRDSKRQKATEGGLEQPYDARDSDGWPSERPKF
LRFHLYKENKDTQDSLTVIGRMLHVQPKNFGFAGTKDKRAITTQQVTVFKQSAAKMAALN
QRLFGMRVGNFSYVDKALVLGMLSGNRFTITLRGVVAETDKSIENAVKGLGESGFINYFG
LQRFGSGSIATHNVGAALIRGEWKAAAELILDPREEDQPEVKEAREYFKKTGNVDGALHK
FPRYLTAERAILGSLKRDSKNYLQAICSIPRTLRLMYVHSYQSFLWNHAASYRAKTYGVD
KVVEGDLVYDKDLQGTDEAPESKIVESSFNDSEVRAPEVLLDDVVEADVPAEASNKIKCL
TKEDVASGKYNISDVLLPLPGGSSIFPANGTADVYHDLASKDSVDLQKSTHNVKEFALPL
LPGAYRLFLQKPVNLEWKILKYSDPTKTLAETDLDRIQKVSEESTEDSKNKVENEQTAFQ
LSFTLPASCYATMALRELMKISTSVAFHKSLNDEPVVTAKATSA
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattttcgttggagtcgccagcttcgcagtgcgagctttacatttgcatgatcat
cggaattgcttctttaagattcttcagcagggctatgcagtaagagctcttggagttcaa
ggaaagcgggggagcatcactggtagtgtcctattggaggaagagacttcggtcacagtt
gaagccctgcagattttgaagaattggaggacaaaacgcgccgtatttgaaatgtctaca
gaagagaatgttgggattttgagttatgcgaattctctcccaggttttcgaggtattctg
aagcagagattttcagattttattgtaaacgaggttgatcttgaaggcaatgtcattcat
ctctcggatcttgaggctcctttagaggaaagggcaaaagttgttaaagtttctgaggaa
ggtgtagcagacgatgaagaggaggtcaacggggaaaagcagccaaaacccttgagtgat
gattatgctgcagatgttctggcctttaaagagatcgctggggagagcaatgcaaaagtg
ctggaaggccttcttgttcaaattgcaaattccaacgatcctgttccgccagtcctactt
gcacctgatgatgacaaaaaccaccgagggatgattcatactttcttcaagagccgttta
acctttattacatctgacaccgtcgatggggcttccgcaacggacaagtgcattcgtctt
cgacatcaacctcgtaaccaaggtgggggaaaccgatttcagaaacggggtagggagcac
ggtggtcggggtcgcggttggggcagggacagcaaacgccagaaggcaaccgaaggtggc
cttgagcaaccgtacgatgcgcgggattcagatggttggccaagcgagcgccctaaattt
ttgcggtttcacctctacaaggaaaacaaggacactcaagattctttgactgttatcggc
agaatgctccatgttcagccgaagaactttggattcgctgggacaaaggacaaaagagcc
attacaacacagcaggtaaccgtattcaagcaatcagcagcaaaaatggcagctttgaat
cagcgattgtttggtatgagagttggaaacttcagttatgtggataaagcattggttctg
ggaatgttgtccggaaatcgattcactattactttgagaggtgtcgtggcagaaactgac
aagtcaatcgagaacgctgtaaaaggtcttggagagagtggcttcatcaattacttcggt
ctacaacgatttggaagtgggtccatagcgacacacaatgtcggagccgccttaataaga
ggagagtggaaagcagcggcggagttgatattagatccgcgggaagaagatcaaccagaa
gttaaagaagcacgagaatatttcaagaagactggaaatgtcgatggggccttgcataag
tttccccgttacttgactgctgaacgggcaattctaggaagtctcaagcgtgattccaaa
aactacctgcaagcaatctgctctattcccagaacattgcggctgatgtacgtgcacagc
taccaaagctttctttggaatcatgcagcgagttatcgcgccaaaacttatggggttgac
aaggtcgttgagggagatcttgtgtatgacaaggatttacagggcactgatgaagcaccg
gaatcaaagattgttgaatcctcttttaacgattcggaagtacgagcccctgaagtgtta
cttgatgatgtggtagaggctgatgttcctgctgaagccagcaacaaaatcaagtgcttg
acaaaagaagacgttgcgtcaggaaagtacaatatttcagatgtgctacttcctttacca
gggggttcttctatattcccagctaacggcactgccgatgtgtaccatgatttggcgagc
aaggattccgtggaccttcagaagtctacccacaacgtgaaggagtttgcgttacctctt
ctgcctggagcgtacagactgtttcttcagaaaccagtgaacttggagtggaaaatactg
aagtatagtgatccaacaaaaactttagctgagactgatctggacagaattcagaaagtt
tctgaagaatccacagaggattctaaaaataaagtagagaatgagcagacagcttttcaa
ttgagtttcacgctacctgcatcatgttacgcaacgatggctctcagggagcttatgaag
atatccacgtcggttgcctttcacaagtctctcaacgatgaaccagtagtgactgcaaaa
gccacgtccgcataa
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