Physcomitrium patens (spreading earthmoss): 112295588
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Entry
112295588 CDS
T01041
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00061
Fatty acid biosynthesis
ppp00071
Fatty acid degradation
ppp01100
Metabolic pathways
ppp01212
Fatty acid metabolism
ppp04146
Peroxisome
Module
ppp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112295588
00071 Fatty acid degradation
112295588
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112295588
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppp01004
]
112295588
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112295588
Enzymes [BR:
ppp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112295588
Lipid biosynthesis proteins [BR:
ppp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112295588
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of breast milk
112295588
Exosomal proteins of breast cancer cells
112295588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
112295588
NCBI-ProteinID:
XP_024403128
LinkDB
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Position
18:14874076..14883520
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AA seq
794 aa
AA seq
DB search
MPAAFNSRSLASGKPDLSFCDVGECTGTPVCWVSTRGLPRQEKSHPFLLHDRHRKSRFFA
KGNYFCGCMGQRVIIRLAQCQFRDCDTKKPTEEWEMKAYPVVVETTKDRRLSFINAHLQM
RASEEYLQPVSQPTIGECIMDEGFSVKLPEKLSTGKWNVHRSALSPLNLKDRWPEHPEIR
TLHDNFMYAKAAFAENKCLGTRIQDDDTVGHYRWMTYGEVGNARTAIGSGLVQHGIPKGS
RIGIYMINRVEWVISELACAAYSYVSVPLYDTLGTDAVTYIVNHAEIAAVFCTLDKIQNL
LSYIAGLPSLRLIVVVGGAEKLLPSLPPQLGIEVVTYSQLKAQGIADHREFVASKPHDLA
TICYTSGTTGVPKGAMISHYNLIASAAGSSQITLFYPSDVHISYLPLAHIYERMNVLIML
HHGVAIGFYQGDILKLMDDMETLKPTILASTPWLYNRIYDKITGTIKASGGLREKLFNAA
YNAKKHALEKGKSPSPIWDRLVFSKVKAALGGRVRIILSGASPISPDILEFLRICFGGFV
SEGYGMTETSCLITGTQPGDYLYGHVGSPSPSCEVKLADVPEMEYTNYDKPYPRGEICVR
GPTLFKGYYKDEVQTREIFDEDGWLHTGDIGCWLPGGRLKIIDRKKNIFKLAQGEYIAPE
KIENVYLRSRFIAQCFIHGDSFNANLVAVAVIDPENLPAWANSRGIEHADDLKQLCDDPV
VRAAVLADMDAVGREAKLRKFEFAKAVTLKVEPFTVENGLLTPTLKVKRPLAKAHFARAI
AEMYAEIAAKEESQ
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgccagcggcatttaactcgcgctcactcgcatctggcaaacctgatctcagcttttgc
gatgtgggtgaatgtaccggcaccccagtgtgttgggtctccactcgcggcctacccagg
caagaaaaatcccacccatttcttcttcatgaccgtcacaggaagtcacgcttcttcgct
aaaggaaactatttttgtgggtgcatgggtcagcgtgtaattattcgattagcacaatgc
cagtttagagactgcgacactaagaagccaacagaggaatgggagatgaaggcatatccc
gtggtcgtggagaccacaaaagacaggcggttaagtttcataaacgcacatttacagatg
agggcctcggaggagtatttacaaccagtgagtcaaccaacaattggcgaatgcatcatg
gatgaaggatttagcgttaaactaccggaaaagttgagcactgggaaatggaacgttcat
agatcagcgctgtctccccttaaccttaaggatcgttggcctgaacacccagagattcga
acgttgcacgacaactttatgtacgctaaggctgcctttgcagagaacaaatgtttggga
actcgtatccaagatgatgatacagttggccattatagatggatgacttacggcgaggta
gggaacgcacggactgcaattggatcaggtcttgttcaacatggcatccctaagggctca
cgtataggaatatatatgatcaatcgagtggaatgggtcatctcagaactagcatgtgca
gcttattcttatgtttctgttccactgtatgacacccttgggactgatgctgttacgtat
atcgttaaccatgcggaaatcgctgctgtgttttgtactctagacaaaatacaaaatcta
ttgagttacattgcagggctcccaagtttacggcttattgtggtagtgggaggagctgag
aaattattgccttcactcccaccccagttggggattgaagtcgtgacttattctcaactt
aaagctcagggtatagcagatcaccgagaatttgtggcatcgaagccgcatgatttagct
actatatgttacacaagtggtacaactggcgttcctaagggagcaatgatatctcattac
aatcttattgcaagtgctgctgggagtagtcaaattacgctcttctatccttctgacgtg
cacatctcttacttgccacttgcccatatttacgagagaatgaacgttctcatcatgctg
catcatggtgtggcaattgggttttatcaaggagatattttgaagttgatggatgatatg
gagacgctgaagcccacaatattagccagtacaccatggctgtacaatcgtatttatgac
aaaatcactggtacaataaaggcttcgggtgggcttcgtgagaagctattcaacgctgcc
tacaatgcaaagaaacatgcactcgagaaaggaaaatctccctcaccaatctgggatcgg
ttagtttttagcaaagtgaaggcagctcttggggggcgggttcgtataatattatcaggc
gcatcaccaatatccccagacatactagagttcttaagaatatgtttcggcggttttgtt
tctgagggctatggaatgacggagacttcatgtcttattactggcactcaacctggggat
tacttatatggtcacgttggatcaccaagcccatcttgtgaggtgaagctcgctgacgtt
ccggagatggaatatacaaattacgacaagccttacccgcgaggggagatctgtgttcga
ggccctaccctcttcaaaggctactacaaagatgaagttcaaacacgggagatttttgat
gaagatggatggctacatactggcgacatcgggtgttggttgccaggtggtcgactcaaa
atcattgatagaaagaagaatatcttcaagttggctcagggagagtacattgcgcccgag
aagattgagaacgtctacctgcgaagtcggttcattgcacagtgctttattcatggtgat
agtttcaacgcgaatcttgtagctgttgctgttattgatccagagaacttacctgcctgg
gcgaattcgaggggtatagagcatgcagatgatttgaagcagctctgtgatgatcccgtt
gttcgagcagctgtgcttgcggatatggatgctgttggtcgcgaagcaaagttgcggaag
tttgaatttgccaaagctgtaacattgaaagtcgagcctttcacagtcgaaaatggactg
cttacacccacactcaaggtgaagaggccactagctaaggctcacttcgcaagggccatt
gctgagatgtatgctgagattgcagctaaggaggaatctcaatag
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