Physcomitrium patens (spreading earthmoss): 112295664
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Entry
112295664 CDS
T01041
Name
(RefSeq) ATP-dependent DNA helicase Q-like 4A
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03440
Homologous recombination
ppp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112295664
03460 Fanconi anemia pathway
112295664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppp03032
]
112295664
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112295664
Enzymes [BR:
ppp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112295664
DNA replication proteins [BR:
ppp03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
112295664
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
112295664
Bloom's syndrome complex (BTR)
112295664
FA (Fanconi anemia) pathway
112295664
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
HRDC
ResIII
Astacin
DinI
Motif
Other DBs
NCBI-GeneID:
112295664
NCBI-ProteinID:
XP_024403298
UniProt:
A0A2K1KZR9
LinkDB
All DBs
Position
2:1147506..1158131
Genome browser
AA seq
1315 aa
AA seq
DB search
MQRKLRLKKDSEDDSNCPQNNFSEYLYRFQDPLKLRETLKAGFLFSLPGQNPNAAGGPGT
CLRLTKFVHQPLDQQLKHVASQAWKSLSSPPVIPKNRVQPGVTGPIDASSAQKFVTGSSY
QPKQSFSNYGKGGDDANSKFHTKDAGRKLENQSSSCMSKFGTHEGQSDTLLRNKSPQTTG
PQNFGPAPVPSDKFFDEQSARGCLSTNANASSADFFSNHVPGLPPRQTPTNSSNSHFRGN
RQRDGALTPAFSMPNHSNVDLQPEHLPNRSKSEKYIPFEEDDDDLLQAIDLDQIVSEHYV
KSCSQQSTQVTNRVGSTTPPSVQSKVRGSLEDVVKAENAASAHKLCSHGVEVHCCGEAGF
HLQEMKDKLIYIINELLDNGDELSPERVQELRLERTELNKDIKALEEAFKNPTSLMNQCR
SNFPPATPYNAFGSGHPSNQQNVFSTPTGPAADYFNPASARPTYGLSSSTAPSGGGLTDF
RQPSFTPVPWENNTGANQASGGFPSSFDSNGPRVGLQVQGGPPRFVDVNYSEGSSEMQFS
KNDFPWSRDLVVNNKKFFGNKSFRLNQREIINATMSGRDVFVLMPTGGGKSLTYQLPAIC
SAGVTLVVSPLVSLIMDQIMHLSEANIPAAYLSGTMEWQEQNEILRNLDAGVYKLLYVTP
EKIARSDRLSQHLTSLYDQRLLARIVVDEAHCVSQWGHDFRPDYQNLGVFKERFPDVPLI
ALTATATLSVKEDVVRALKLTRCIIFRQTFNRPNLRYEVLPKSKKCLEDIDKFIRERHPN
ESGIIYCLSRSDCEKVTEKLREFGHKVAFYHGQMDPDERSYVQRMWSKDEVNIICATVAF
GMGINKPDVRFVIHHSLPKSLEGYHQESGRAGRDNLPASCILYYTYADSIRLKHMLTQGA
AELGSTGSSFRNHNTVTSNQLSTNLDNLNRMIGYCQNDIDCRRSLQLAHFGEMDFDVSSC
KGTCDNCARMGNSGSVEEDVSETARQLVQLVGAMGQRSSMTHIVDVFRGSLNQQVKKMGH
DQLDLHGAGKKFTKTEVERIMQQLLTGNIFREDVNKSDYYGGLSSIIKVNEMQARELVSG
RLKISIRFRAAKKPDRPERSETPAKKSSLPVGLRTPAQDEVVSVPQAPVDPMLSSKVFSA
LQRLRIVLVNEAGGDLMPYHIMGNGELQSISKKLPKTTEELLEINGIGKVKSKKYGARIL
EVVAQTVNEHLSGGEDVSFDNGNSGSATASKRRREVEDGGWKNTRKNTAAEVGRNYNDIE
NGFRQDTMQQTTKKAKVPPAFVQPLSTSKFENENNYFEEEEDIYEDMPEGFLDNY
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaggaaactcaggttaaagaaagactcggaagatgacagcaattgtcctcaaaac
aatttttctgagtatctatacagatttcaggacccattgaagttgagagagacccttaag
gcgggttttctcttttctttgccagggcagaatcctaatgctgcaggagggcctggcact
tgtctgaggctgaccaagtttgtacatcaacctcttgatcagcaactgaaacatgttgct
tctcaggcttggaagagcttatcctcgccgccagtaattcctaaaaatcgtgtacaacca
ggagttactggtcctattgatgcatctagtgctcagaagttcgtaacaggctcttcttac
cagcccaagcaatcattttctaattatggaaagggcggagacgacgccaacagcaaattt
cacaccaaagatgctggtcggaagctggaaaaccagtccagctcttgcatgtcgaagttt
ggtactcatgaaggacaatcagataccttattacgaaacaagtctccacaaacaacaggc
cctcaaaacttcggtcctgctccggtgccttcggataagttttttgatgaacaatcagct
cgagggtgcttgtccacgaatgcgaatgcaagttctgcagatttcttttctaaccatgtc
cctgggctgccacctaggcaaactcctacaaatagcagcaactctcattttaggggaaac
cgtcaaagagacggcgcacttactcctgcatttagcatgccaaatcatagtaatgtagac
ctgcagccggaacacctgccaaataggagcaagagtgagaaatacattcctttcgaggag
gatgacgatgatctcttgcaggcgatcgatcttgatcagattgtttctgaacactacgtg
aagagttgctctcagcaaagcacccaagtgacgaacagggttgggagtaccacaccgcct
tctgtgcaatcgaaagtgcgcggttctcttgaggatgttgttaaggcagaaaatgcagca
tctgcccataagctctgttcacatggggtcgaggttcattgttgtggagaagcaggtttt
cacctccaagaaatgaaggacaagttgatctatataatcaatgaacttctagataatgga
gatgagcttagtccagaacgtgttcaggaacttcgccttgaaaggaccgagctcaacaaa
gatattaaagctctcgaagaagctttcaagaatccaacctctctaatgaatcaatgtcga
tctaacttccccccagctactccttataatgcttttggatctggccacccatccaatcaa
cagaatgtattttccactcccactggtccagctgcggattactttaatccagcatctgca
cgtccaacgtatggactatcgagctcaacggcacctagcgggggaggtctgactgacttc
aggcaaccaagtttcactccagtgccttgggagaacaatactggtgcaaatcaagcgtca
ggaggatttccatcttcctttgatagtaatggcccacgtgttggccttcaagttcaaggt
ggacctccacgatttgtagatgtcaactactccgaggggtcgtccgagatgcagtttagc
aaaaatgactttccctggtcaagggatttggtggtcaacaataagaaatttttcggaaac
aaatcctttagacttaaccaacgggaaattatcaatgccactatgagtggtagagatgtc
tttgtattgatgcctactggtggagggaagagtctcacatatcagctacctgctatttgt
tctgcaggggtgacacttgtggtctctcctcttgtctctctcattatggaccaaattatg
cacctttcagaggctaacatacctgctgcatatctgagtggcacaatggagtggcaagag
cagaatgaaattctaaggaatctcgatgcaggggtttacaagttgctctacgtaacgcct
gagaaaattgctaggagcgatagactgtcgcagcatcttacaagcctgtatgatcagaga
ttacttgctcgaattgtggttgatgaagctcactgtgtaagccaatggggtcatgatttt
cgtcctgattatcagaatcttggcgtcttcaaagaaaggtttcctgacgtacccttgata
gctctgacagcgactgctaccttaagtgtcaaagaagatgttgttcgagctctcaagctg
acacgctgtattatctttagacagacttttaatcgacccaacttgagatacgaggtttta
cctaagtcaaagaaatgtcttgaagacattgacaagtttataagggagaggcaccccaat
gaatctggaattatctactgtctatcgcgaagtgactgtgagaaagtgaccgaaaaacta
cgggaatttggtcacaaagttgctttctatcatggacaaatggatccagacgagcggagt
tatgtgcaacgcatgtggagtaaagatgaagtcaatataatatgtgcaacggttgctttt
ggcatgggtataaacaagcccgatgtgcgttttgtgattcaccattcacttcccaagtca
cttgagggctatcaccaggaatcggggcgagctggtagagataacttaccagcatcttgt
atactctattacacctatgcggactctattcgtttgaagcacatgttaacccaaggtgca
gcagagctgggctctacgggatcatcgtttcgtaatcacaatactgtcacatccaaccag
ctttctaccaacctcgacaatttgaatcgcatgattggttattgtcaaaacgacattgat
tgtcggcgatctttgcagcttgcccattttggtgagatggattttgacgtctctagctgt
aagggaacttgtgataattgtgccagaatggggaactctggttctgttgaagaggatgtc
agtgagacagccagacaacttgtgcagttagtcggtgcaatgggtcaacgctcctcaatg
actcacatcgtagatgtatttcggggttctctcaatcagcaagttaagaaaatgggacat
gaccagcttgatctgcatggagctggtaagaagtttacgaagactgaagtggagcgaatc
atgcaacagctacttactggaaatatctttcgagaagatgttaacaaaagtgactattat
ggtggtttatcctccatcatcaaggtgaacgagatgcaagcaagagagcttgtttcaggt
cgacttaaaatatccatcaggtttcgagcggctaagaaaccggacagaccggagagatca
gaaaccccagctaagaaatcttctctgcctgtcggacttagaactccagcgcaagatgaa
gtggtttcagttcctcaagctccagttgatcctatgctgtcaagcaaggttttttctgct
cttcagagacttcgtattgtacttgttaatgaagccggaggggatcttatgccatatcac
attatggggaatggagagcttcagtccataagcaaaaagttgccgaagaccacagaggaa
ctcttggaaattaacggcatcgggaaggtgaaaagcaaaaaatatggtgcccggattttg
gaggtagttgctcaaactgttaatgagcacctgtcaggcggtgaagatgtgagcttcgat
aatggtaattcaggatcagcaacagcatccaaacggcggagggaagttgaagatggggga
tggaaaaacactcgaaagaacactgcagctgaagtgggaagaaattataatgatattgag
aatggcttcagacaggataccatgcagcaaaccacaaagaaggcgaaagtgcctcccgcc
tttgtgcaacccctgtcaacctcgaagtttgagaatgagaacaactattttgaagaagaa
gaggacatttatgaagacatgccggagggttttctcgataattactga
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