Physcomitrium patens (spreading earthmoss): 112295871
Help
Entry
112295871 CDS
T01041
Name
(RefSeq) syntaxin-125
KO
K08486
syntaxin 1B/2/3
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112295871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112295871
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112295871
Membrane trafficking [BR:
ppp04131
]
SNARE
Syntaxin (Qa)
Stx-PM
112295871
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
112295871
Exosomal proteins of other body fluids (saliva and urine)
112295871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
MCPsignal
PSD13_N
DUF3967
Motif
Other DBs
NCBI-GeneID:
112295871
NCBI-ProteinID:
XP_024403658
UniProt:
A9TRV1
LinkDB
All DBs
Position
19:2684489..2686074
Genome browser
AA seq
313 aa
AA seq
DB search
MSDLFKGIWKGGKGGKVGNGEDTFGDVESGCVIQMTSLDADPSSMADFFREIGVVQGKVN
DVKILLLKLQSAHEKTKGTHKASELKEIRAEMDGDIESVTKAAQFMKFKLAELSKSNLAN
RQVKGCEEGTTTDRQRMALTNSQRKKLKELMDEFQALRATMMDEYKETITRRYYNVTGKQ
ADEETTENMIRTGESETFLQQAIRQQGRGQLIETIREVQERHDGVKEIERHFMEIHNIFT
DISVLVDAQGQMVNEIQDNINRATSFTHRGADQLATARRRQIRKRKWTCVSILLLIVLIL
VLIIALKIAKIIP
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacttgtttaagggcatttggaagggcgggaagggcgggaaggtaggaaatggc
gaagataccttcggagatgttgagagcggttgtgtgattcagatgacaagcttagacgca
gatccgagtagcatggcagatttttttcgtgagataggggtagtgcaagggaaagtgaac
gatgtcaaaatccttctccttaagctccagagcgcacatgagaaaaccaaaggaactcac
aaggcaagcgagctgaaagagattcgggcggagatggacggtgacatagagtccgtgact
aaagcggcgcaattcatgaagttcaaactggcagagctgagtaaatcgaatctcgctaat
cggcaagtgaagggctgtgaggagggaaccaccacagaccgccagagaatggcattgacg
aacagccaacgcaagaaacttaaggagctcatggacgagttccaggcgctgcgtgcaaca
atgatggacgagtacaaggaaaccatcactcgcaggtactacaacgtcaccgggaagcaa
gccgacgaagaaactacagagaacatgatccgcaccggcgagagcgaaacctttctgcaa
caagccatccgacagcaaggccgaggccaactaatcgagaccatccgagaggttcaggaa
cggcacgacggcgtgaaggagatcgagcggcacttcatggagattcacaacatcttcacg
gacatctccgtgctggtggatgcgcagggccaaatggtgaacgaaatccaggacaacatc
aatcgcgcgacgtctttcacgcaccgcggtgccgatcaattggcgaccgcgaggcggcgt
cagatcagaaaacggaagtggacctgtgtgtccatcttgttgctcattgttctcatcctt
gtcctgatcatcgccttaaaaattgctaaaataattccatag
DBGET
integrated database retrieval system
