Physcomitrium patens (spreading earthmoss): 112295887
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Entry
112295887 CDS
T01041
Name
(RefSeq) retinoblastoma-related protein-like
KO
K04681
retinoblastoma-like protein 1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppp03000
]
112295887
Transcription factors [BR:
ppp03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
112295887
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
112295887
NCBI-ProteinID:
XP_024403679
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All DBs
Position
19:complement(5961625..5970364)
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AA seq
985 aa
AA seq
DB search
MPEGRGVDMNGETMSMEVREAQSPLKSENSQPKRRSPLRACKPENVDVNVVSSKQAGQGM
AGGPSTNGSDTKSRTGSNVEKFVEVAEARFRKRCEVGLGLGDGTTQEAMRLFRASKHLLK
TNIGTIGTGTAEETERLWSACVLYVVRRLGTGVCAGGDRVENGAPAGFTFSQLLRETRLS
VVEFFKELPQFLAKAGPTLKSVYGEDWEKRLQVKEVQANFVHLMVLYNYYKRIYQHLFVL
PEKQARGGNGLCLGGGGDAATPVHMRFGWMLFLALRTHVLNHFADLVTCTNGLLAVIIVL
IIHIPLTWRRFSFDDKLKFAKRSAEGVNLVGSLCYLYNASEEDVAGMVAKLNEMIKVLIG
SPATGMDGGDIPQIGGMNPDGVTYFEGLMEVEQISSNLVILEEDYDGWYRSRGELDERMF
INGEDSLIGAVSSSSTTSVCGVKRKRDAVTSAGQGRAVSSGASPSSPCGSPESSPAVMGG
VAGGSTCKPPPTPVSITMTTAKWLRTVIAPLSAEPSPELERYLRVFERNIASEMKVRANV
ILGGIFEARKWRGAGEAGTSDSMWGDQRRLEALKLYYKVLGAMCTAESHRLRSEHLPFLP
NERFHRCMLACSAELVLASHKTVTMTFPAVLEPAGITAFDLSKVIEGFVRHEETLPRELK
RHLNSIEERLLESMAWEKGSSMFNSLAIAKANLAPEINRLKLMAEPMPALDTSKAQQRSP
VDTADGRIGGSKVDDPAGESKGGAASPPRQGSMTAVKGNAGATGGSAEQGESASFMSPAR
GPSAFTAFSSPQKSRAMPPLLLAFASPQRPNPQAGGETCAETCINVFFQKVLKLAAVRIR
NLCERLQQSQQVVERVNRALHHALNHETGLFFNRHIDQIILCCVYGICKVSKVNVTFRDI
IYHYRKQPQCKPYVFRNVLLDGSVVWRSGKAGQETGDIIRFYNEVFVPSTKSFLLQVGSS
AGVAVPSSVGVPYERNQGEGDPLSW
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaggacggggcgtggatatgaacggtgagacaatgagcatggaggttagggag
gcgcagtctcctctgaagtctgagaattcccaacccaagagaaggtctcctttacgggcg
tgcaagccggagaacgtagacgtgaacgttgtgagtagcaagcaggctggacaggggatg
gcaggagggccgagcacaaacggctcggacaccaaatcgaggaccggaagtaacgtggag
aagttcgtggaggtggcggaagcccgtttcagaaagcgctgcgaggttggtcttggcctg
ggcgacggaacgacacaagaagcgatgcgattgttcagagcgagcaaacatctcctgaag
accaacatcggcaccatcggaaccgggacggcggaggagacagagcgcctgtggagtgcg
tgcgtgctgtacgtcgtgagaaggctgggcaccggggtgtgtgcagggggggacagagtt
gagaatggagcacccgcggggtttacattctctcagctgttgcgggagacgaggctgagc
gtggttgaatttttcaaggagctcccccagttcctcgcaaaggctggcccgacgctgaag
tctgtgtacggagaagattgggagaagcggctccaggtgaaggaagttcaggccaatttt
gttcacctgatggtcctgtacaactattacaagaggatttatcagcaccttttcgtactc
cccgagaagcaggcgagaggtgggaatgggctgtgtttaggtggcggtggggacgcagcc
actccggtgcacatgcgttttggttggatgctgtttttagcgctgcggacgcacgtgctg
aaccacttcgcggacttggtgacttgcaccaacgggctgttggctgtgattatagtgttg
atcattcatataccactgacgtggagaagattttcgtttgacgataaactgaagtttgca
aaaaggagtgcggaaggggtgaacctagttggatcactgtgctatctgtacaatgcatca
gaggaggatgtggctgggatggtggcgaaactgaacgaaatgataaaagtcctgattggc
agtcctgcgactgggatggacggtggcgacatcccgcaaattggcgggatgaatccagat
ggcgtgacatactttgagggcttgatggaggttgagcaaatatcatcgaatctggtgatt
ctggaggaagattacgatgggtggtatcgcagtcggggagaactggatgaaaggatgttc
atcaatggtgaagacagcttgataggtgctgtgtcgagcagcagcacgacaagtgtgtgt
ggggtgaagaggaagcgcgacgcagtaacttcagcgggacaggggcgtgcagtatcatca
ggggcatcgccttcgtcgccatgcggttcacctgagtcatcgcctgctgtaatgggaggc
gtagcgggtggtagtacctgtaaaccccctcccacacctgttagcattactatgacgaca
gctaaatggctgcgcactgtgatagcaccgttgtcggcagagccatctccggagttggag
cggtacttgcgggtttttgagcggaacatcgcgtcggagatgaaggtgagggcgaacgta
attcttggaggcatctttgaggcccgaaagtggcgaggagcgggagaggcgggaacttcg
gacagcatgtggggcgatcagcgcaggctggaagcgttgaagttgtattacaaagttttg
ggggccatgtgcacggcggaatcccatcggctgcgcagcgagcatcttccgtttctgccg
aatgagcggtttcatcggtgcatgcttgcgtgctcggcagaactggttttagcgagtcat
aaaaccgtgacgatgacgtttcctgcggtgctggagccagcagggataaccgcgttcgat
ttgagcaaagtgattgaagggttcgtgcggcacgaggagactcttcctcgggagctgaaa
cggcacttgaattctatcgaggagagacttctggaaagcatggcttgggagaaggggtct
tcgatgttcaactctcttgctatcgcgaaggcaaatcttgcgccggagatcaaccggctg
aagttgatggcggagcccatgccagctttggatacctcgaaagcgcagcaacgttctcca
gtggatacggcggatgggcgcatcggaggttccaaagtggacgacccagcaggggaatcg
aaagggggagcagcctcgccacctcggcaagggtcaatgacagccgtgaaaggcaatgcg
ggtgcaacaggtggcagcgcagagcaaggtgagagcgcgagtttcatgtcaccagcgaga
ggtccttctgcattcacggcgttcagttctcctcagaagagccgggcaatgccgccgctg
ctgctagcttttgcaagcccccaaaggccgaatccgcaggctggaggcgaaacctgtgca
gagacttgcatcaatgttttttttcagaaggtgttgaagctggctgctgttcggattcgg
aacttgtgtgaacgtctgcaacagtcgcagcaggtggtagaacgtgtgaaccgtgcgttg
catcatgctctgaaccacgaaacaggtctattcttcaaccggcacatcgaccaaatcatc
ctgtgctgtgtgtacggtatctgcaaggtgagcaaagtgaacgtgacttttcgagatatc
atttaccactacaggaagcagccgcagtgcaagccgtatgtgttccgcaacgtgctcctt
gacgggtcggttgtgtggagatccgggaaagcagggcaggagacaggggacataataaga
ttttacaacgaggtgttcgttccttcaacgaagtcgttcttgctgcaggtgggctcgagt
gcaggcgtggcagttccaagcagcgttggtgttccttatgagagaaatcagggtgagggt
gaccctttatcctggtaa
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