Physcomitrium patens (spreading earthmoss): 112296060
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Entry
112296060 CDS
T01041
Name
(RefSeq) light-mediated development protein DET1 isoform X1
KO
K10571
de-etiolated-1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112296060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112296060
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112296060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
112296060
NCBI-ProteinID:
XP_024403941
LinkDB
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Position
19:complement(3142022..3146975)
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AA seq
891 aa
AA seq
DB search
MWKQSDNILHRLFSRQISSGRPNTHIHRVRELYENVVPSHTVYEVDCPDQCWRRFTNDGQ
YLICFSKTYHDLLIYRPLWPTYCSTLDSANDLPSKSKKFESYFSLLHQIPLARDADEVIC
KDFFLCTENNLYGIFATSTDPDPNAAASNGSVPGVPSIEKITFLVVRFADGVITGRSVFK
DDYIHLAHNAGVFLHEDLLAVLSIRFQCIHILQVREGGLFLDVRSIGDFCRDDDELLLNS
QAQAEAKFQEEQRQQLKARGRVHETEVLVPVPQSIKTNGLKPLNTLNDRKRPRIRDSRAA
HDDFGTSRGHPQFFGEGSVAIQEIDILYDGYFRGLFTVADGPIADAGRIHGNGGMRTHSN
GEYNNHALGNPHIRGFRSHLGANPSRHSNSNNHVRTFPASEEAGNHTSLEWRHLVSDRDH
SSYDISHGRRFETVAQNGSRENLSGRLLISARDRATYDNPTSRWNGNNLSSSGNLYSSGG
SDLASHSYNSTTDRGSSEATTLHELSSHREEPGSSERRYRPVPSLSTSGRSMAAPNNLSR
SVFRDDFSLDDPSMGRSRSRLGGEDQVTNSSGTSLGRVGQTGSGNFGTSYATIGQDNARG
DGTQTGNAAATGTGGNEVQEGSQILRGLKQRLLSFILQGIVDDEDISPAVKSQRLKRFYF
NFQQYVDLVMWKVQFLDRCHLLVKFGSVNGVVLRNSETSHQIAFLAVYNMETTEILSFYQ
QNSSEELLQLVEQYWDHFRMVPQNPQYMRFISSYANNGFAREQLRKQKAACLSGKAGSYA
QSIKRTLASLPHNSQSQSPSAYFDQYLFHYDEKLISSTDRHKPCAEHPIKFVSRRRPNLL
KFKINPGLELGSNDGHIKRVASYLFHPIYPFAISVQQSFMQTSIVNFHFRR
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaacagagtgataacattttgcatcggcttttctcccgacaaatcagctccggt
cgtcccaatacacatatacatagggtacgagagttgtatgagaatgtcgtgccgagccac
acggtatatgaggtggattgtcccgatcaatgttggcgacggttcaccaacgacggacaa
tacttaatatgtttcagtaagacatatcatgacttactcatctaccggcctctgtggccc
acgtattgttccacattggattcagccaacgatctgccatcgaagagcaaaaagtttgaa
agttatttcagcttgctccatcaaatccctcttgcaagagatgccgatgaggtcatttgc
aaggactttttcttatgcacggagaacaacttgtatggcatttttgccacatcaactgat
ccagatcccaatgccgcagcttcaaatggctccgtgccaggagtgcccagtattgaaaag
ataacattccttgtggtccgcttcgctgatggggttattacggggcggtccgtctttaaa
gatgactacatccatttagctcacaatgctggtgtttttctgcacgaggatctgctggct
gtattgtcaatacgcttccagtgcattcacattctgcaggttcgagaaggaggactcttc
ttagacgtgcgcagcatcggtgatttctgtcgagatgatgacgagcttcttcttaattct
caggctcaggctgaggccaaatttcaggaggagcaaagacaacagttgaaagctcgaggt
cgggttcatgaaactgaagtgttggttccagttcctcagtcaatcaagaccaatgggctt
aaacctttgaacactttaaatgacagaaagcgtccgcgtattcgggacagtagagctgca
catgatgactttggcacttcccggggtcatcctcagttttttggtgaagggagtgttgct
attcaggagattgacattctctatgacggttactttcgaggcctttttactgttgcagat
ggacccattgctgatgcgggcaggatacacggaaatggtggtatgaggacgcattcaaat
ggagaatacaacaatcacgctcttggtaatcctcacatccgcgggtttcgttctcattta
ggagcaaacccgagcagacattcgaatagcaacaatcatgttcggacgtttccggcatcc
gaagaggctggtaatcatacaagcttggagtggcgtcatctcgtttctgacagggatcac
tcgagctacgacatttcacatggtcgccgatttgaaacagtggcgcagaacggtagtcgt
gaaaatctgtcaggacgtctgcttatttcagcgagggatcgtgctacgtatgacaaccca
accagtcgatggaatgggaacaacttgtcttctagcggaaacttgtatagtagtggtggt
agtgatttagccagccacagttataattcgaccaccgatcgtggatcttccgaagccacc
acccttcatgagctatccagccatagagaagagccaggttctagcgaaagacgttatcgt
cctgtgcctagtttatccacaagtgggcgatcaatggcggctcctaacaatctttcgagg
tcggtgtttcgtgatgatttcagcttagatgatccctccatgggacgctctagatctaga
ttagggggtgaggatcaggtcaccaacagttctgggacttctctaggtagagtagggcag
acaggatcaggtaattttggaacttcttatgctacgattggacaagacaatgcgagggga
gatgggacccaaacagggaatgcagctgctacagggacgggtggaaatgaagtacaggaa
ggaagccagatattgcgtgggctgaagcagcgcctgttgtcatttatcttgcagggtatt
gttgacgatgaggacatatctcctgctgtcaagtctcaaagactcaagcgcttctatttt
aatttccagcagtatgtggacctggtgatgtggaaggttcagttcctagatcgatgccac
ttgcttgtaaagtttggaagtgttaatggagtggtacttcgaaactctgaaacgtcgcat
caaattgcttttttggctgtatacaacatggaaacaacggagatattaagcttctatcag
cagaattcatccgaggagttactacagttagtagagcaatattgggatcacttcaggatg
gttccgcagaaccctcagtacatgagattcatttccagttacgcaaataatggcttcgct
cgtgagcagttgcgtaagcagaaagctgcatgtctttctggcaaagctggtagctatgct
cagagcatcaagagaactctggcctccctgccccataactctcaatctcaaagtccatct
gcatattttgatcagtacctattccactatgacgaaaagttaatatcttcaaccgatcgg
cataaaccatgcgcagaacatccaatcaaattcgtttctagacgtcgaccgaatctactg
aaatttaagatcaaccctggattggaacttggttctaacgatggacacatcaagcgagtc
gcttcttacttgttccatcccatttatcctttcgccatctcagttcaacaatcattcatg
caaacctccattgtgaactttcactttagacgttaa
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