Physcomitrium patens (spreading earthmoss): 112296083
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Entry
112296083 CDS
T01041
Name
(RefSeq) ATP-dependent DNA helicase pfh1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppp03032
]
112296083
03029 Mitochondrial biogenesis [BR:
ppp03029
]
112296083
Enzymes [BR:
ppp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
112296083
DNA replication proteins [BR:
ppp03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
112296083
Mitochondrial biogenesis [BR:
ppp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
112296083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
Pif1_2B_dom
AAA_19
Herpes_Helicase
UvrD_C_2
DEAD
zf-CCHC
AAA_22
Viral_helicase1
zf-CCHC_3
PhoH
Motif
Other DBs
NCBI-GeneID:
112296083
NCBI-ProteinID:
XP_024403996
UniProt:
A0A2K1IX83
LinkDB
All DBs
Position
19:2755349..2759283
Genome browser
AA seq
699 aa
AA seq
DB search
MLAKAAMTSGYGSQLDPLTLDSDEHSSECDTDSLTRKAPTVVSDFATSADTSASTFKRPR
VEPAEFSVRAHGFKRPRQKPCVTASGTETPSFIPLSTFPEVEDANGVGDCFIVPSPPNPQ
IHSLTPQQRLVIDLVQKGKNVFYSGSGGTGKSLVLHHIVGILKDRFRDEHNDRLAQGSSC
GCCACKVAITAPTGIAAIPIGGTTVHRATGIGIPRRRQDFNRMWNAPVKRRWRNMSVWII
DEISMVSAELLESLEQMIRRIRTPADLLPGVPFGGLQVIFSGDFFQLQPVLEKITHTSDD
QFLNRGLAFEAPAWTRAKLTPVILQHVFRQSDGDFVDLLNGIRTGENPAALEEIAKRCSR
PLPMEAGILPTVLYSKNADVDKYNHDRLRELPEQEVVLVAEEHIYTNEGLKKEEARNLAL
QQAQFNQLRDAEFWKLCTALKELSLKVGAQVMLVRNLTLTGKESDLVNGSRGVVVGWAFR
DVILEECRAVLRSKQYPETPKEVEAQLMYDKLKATCFNLIPIVRFRNGREIYCVPERFSY
EILNTGECVRWQVPLKLAWAITIHKCQGMSLDYVQVTLKDIFAEGQVYVALSRARSMEGL
QVIGNPSRGDVRVSPKVMEFYRALTANEASSVCPLDFPDVPIVVPPEEILDRVKASHMVR
TDASFEKFIPKSDPPISVTCYHCKKQGHAAFECRMRPIL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgttagccaaggcagcaatgacgagtggctacgggtcgcaattagaccccttgactctc
gattcagatgagcattcgagcgagtgtgacacggatagcttgaccaggaaggcaccgacc
gtggtgtctgattttgcaacctccgcagatacgagcgcttccacgttcaagcgacctagg
gtagagccagctgagttttctgtgcgggctcacggcttcaaacgtccgagacagaagcca
tgcgtaactgcaagcgggaccgagacccccagtttcattcccttgtcgacatttccggag
gttgaggatgctaatggggttggggattgtttcatcgttccatctcctccgaatccacaa
atacactccctcacgcctcaacagcgtctggttatcgaccttgtacagaagggcaagaat
gtattttattctggatccggagggacggggaaatccttagtgcttcaccacatcgtcggc
attctcaaggacaggttccgggacgaacacaatgacaggctggctcagggatcgtcttgc
gggtgttgtgcctgcaaagtggccattacggcgcctactggcattgcagcaattcctatc
ggagggaccactgtacatagagcaactggaattggcattccacgacgtcgtcaggatttc
aacaggatgtggaacgctcccgtgaaacgtagatggcgcaatatgagcgtttggatcatc
gacgagatctcgatggtgagtgccgagttgctagagtctctggagcagatgataagaagg
attcggacaccagcggatcttctgccgggtgttcccttcggtggacttcaggtcatattt
tccggcgatttctttcagctgcaaccagtgttagaaaagataacgcacactagcgatgat
cagttccttaacagaggactggcgtttgaggcacctgcgtggacgagagctaagctcact
ccagtcatcttgcagcatgttttccgtcagagcgatggcgatttcgttgacctactgaat
gggattagaacgggggagaacccagcagctttggaggagattgccaagcggtgctcaagg
ccattgcctatggaagctgggattctacctacggttctgtattcaaagaatgcagatgtc
gacaagtacaatcacgatagattgagagaattgcccgaacaagaagtggttttagttgcc
gaggaacacatttataccaatgaaggactcaaaaaagaagaagctcgaaaccttgctctt
caacaagcgcagttcaatcagttgagggacgctgaattttggaagctctgcactgcgctc
aaggagttgagcttgaaagtcggagcacaggtcatgttggtccggaacttgacacttacg
ggcaaggagagcgatctcgtgaacggctctcgtggcgttgtggtggggtgggcgttccgg
gacgtcatcttggaagaatgtcgagctgtgctgagaagcaaacagtatccggaaacgcca
aaagaggttgaagcacaattaatgtatgataaactcaaggctacctgctttaatcttatc
cctatcgtcaggttcagaaatggtcgtgagatctactgcgtgccggagagattctcttac
gagatcttgaatactggagagtgcgtaagatggcaggtgcctttaaagctggcctgggct
atcactatccacaaatgccaaggaatgtcgctggactatgtccaagtcaccctgaaggac
atcttcgccgaaggccaagtatatgtggcgttgagtagagcgcggtctatggagggcttg
caagtcatcgggaacccctcccgcggagatgtccgggtgagtccgaaggtaatggagttt
tacagagccctgacagctaacgaggcgtcctccgtttgtccattggacttccccgatgtg
cctatcgtagtccctccggaagagatactagacagagtaaaagcctcgcacatggtgcgc
accgatgcttctttcgagaaattcattcccaagagtgaccctccaatttctgtgacctgt
tatcactgtaaaaagcaaggccatgccgcgtttgagtgcaggatgaggcctattttatga
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