Paenibacillus polymyxa SQR-21: PPSQR21_000540
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Entry
PPSQR21_000540 CDS
T03178
Name
(GenBank) hypothetical protein
KO
K07114
Ca-activated chloride channel homolog
Organism
ppq
Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppq02000
]
PPSQR21_000540
Transporters [BR:
ppq02000
]
Other transporters
Pores ion channels [TC:
1
]
PPSQR21_000540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
GTP-bdg_N
Big_11
DUF1194
PSK_trans_fac
Motif
Other DBs
NCBI-ProteinID:
AHM63783
LinkDB
All DBs
Position
56466..57215
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AA seq
249 aa
AA seq
DB search
MKQILIITDGCSNVGVSPVMAAAQALREGITVNVAGVIDYGTIGELGSAEIQEIARAGGG
FSQIVGTKQLAQTMQMMTRKTVVQTIQQAVNRELTHILGEGGARHIGELPPAKRAQVVEV
MDELTETSPLEIALLIDASASMKPKLPAVEDSIRDLLLSLQSRSGLSRISVFHFPGGRMG
EDAVMDIGWTSELDQIKSIFGRLRMKGATPTGPAILQVIDYYRYVTLGEQKDLEESYGKG
EGMLGDYVV
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaattttgatcattacagatggatgctctaacgtaggggttagcccagtgatg
gcggctgcccaagctttacgtgagggaattacagtgaatgtcgccggagtcatagattat
ggaaccatcggcgagcttgggagcgcagagattcaggaaattgctagagcagggggaggg
tttagccaaatcgtcggtacgaagcagttggcgcaaaccatgcaaatgatgacgcgcaaa
acagtggttcaaacgattcagcaggcggttaatagagagttaacgcacattttgggtgag
ggcggtgcccggcatatcggtgaactgcctccggccaaacgagctcaggtagttgaggta
atggatgaactgacagaaacaagccctctggaaattgctttactcattgatgcaagtgca
agcatgaagcctaagctgcctgctgtagaggatagtatccgcgatttgctgctcagttta
cagtccagaagcggactcagccgtatatctgtatttcattttccgggtggacgaatggga
gaagacgcagtcatggatatcgggtggacctctgagctagaccagatcaaatcgatattc
ggacgcttgcggatgaaaggagcgacaccgacaggaccagccattttacaagtgattgat
tattaccgatatgttacactaggggaacagaaagatctggaagaatcctatggcaaagga
gaagggatgctcggtgactacgtcgtctga
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