Paenibacillus polymyxa SQR-21: PPSQR21_000890
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Entry
PPSQR21_000890 CDS
T03178
Symbol
dacC
Name
(GenBank) d-ala-d-ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq00550
Peptidoglycan biosynthesis
ppq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PPSQR21_000890 (dacC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppq01002
]
PPSQR21_000890 (dacC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppq01011
]
PPSQR21_000890 (dacC)
Enzymes [BR:
ppq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PPSQR21_000890 (dacC)
Peptidases and inhibitors [BR:
ppq01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
PPSQR21_000890 (dacC)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppq01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
PPSQR21_000890 (dacC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Beta-lactamase
Pilin
Motif
Other DBs
NCBI-ProteinID:
AHM63815
LinkDB
All DBs
Position
120186..121574
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AA seq
462 aa
AA seq
DB search
MKANNFKKNNKRSMIKKSVTAVMVLNMMYMSALPVVGNFDSSVATFAAGAATEATNITGT
GSINPPSLALRSAILVEPSTGQVLLSMNPDEPLPPASMTKMMTEYLVAEQVKQGKLKWTD
KVTVNENASKSIGSRIFLAQGDQHTVEELYIAMAVGSANDATVALAERVSGTEQDFVKLM
NETAQKMGMKNTYFINSTGLDRKDMPTGFQPDTDRETVMTARDAATLASYIIKDHPDYTR
FTTIQSYKFRPTDKAPIINYNWMLEANKNITNFRKFAYPGLDGMKTGHTSNAGNCFTGTA
ERNGMRLISVVMGADSEPHRFTETAKVLNYGFDNFEVKQVVAPKTVVKGVENVPVTKGTE
TEVPIVTKDAVSFIVPKGASNPKVTFTTNITPASSLVAPLKQGAKVGTITYTYKTDGVDK
GQTKTVDLVTTTAVEEGGWFRMLFRAIGDFFGDLFQGIKNLF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagcgaacaattttaagaaaaataataaacgcagcatgattaaaaagagtgtgact
gcagtcatggtgcttaatatgatgtatatgtcggccttacctgttgtaggcaatttcgat
tcaagcgtggctacttttgctgctggagcggcaacagaggcaacgaatatcacggggaca
ggttctattaacccccctagtctggcacttcgttccgccattttggtcgagccttccaca
ggacaggtcttgctttctatgaatccagatgagccgctcccgccagccagtatgaccaaa
atgatgacagagtacctcgtagcggagcaggttaagcaaggaaaacttaagtggacggat
aaggttacggttaacgagaatgcttctaagagtatcggatcacgtatttttttggctcaa
ggggatcaacatacggtagaagagctttatattgccatggcagtaggttctgccaatgat
gcaacagtagctcttgctgaacgcgtatctggaaccgagcaggattttgtaaaactaatg
aatgaaacagctcagaaaatgggtatgaaaaatacgtattttatcaactcgactggtttg
gaccgtaaggatatgcctacagggtttcagccggacacagaccgggaaactgtaatgaca
gcgagagacgcagctactctggccagttacatcattaaggatcatccggattatacacgg
tttaccacaattcaatcgtacaaatttaggccgaccgacaaagcaccgattattaactat
aactggatgctagaagcgaacaaaaatattactaactttagaaaatttgcttatcctggc
ttggacggaatgaaaacgggccatacgagcaatgctggaaactgttttacaggtacggct
gaacgtaatggaatgcgtctcatcagtgtagttatgggagcagattcagagcctcaccgt
tttacagagacggctaaagtgctgaattatggctttgataactttgaagtgaagcaggtt
gtggctccaaagacggtggttaagggcgttgagaatgtgcctgtgaccaaaggtacagaa
acagaagtgccgatcgtcacaaaagatgcagtaagttttatcgtgcctaagggtgcgagc
aatcctaaggtaacctttacaacgaatataacaccagcaagctctctcgtggcacctttg
aagcaaggggcaaaagtcggaacgattacgtacacatacaaaacggatggcgtggataaa
ggccagacgaaaactgttgatttggttacaactacagcagtagaagagggcggttggttc
cgaatgctattccgggcaattggtgatttcttcggcgatttgttccagggaattaaaaat
ctcttctaa
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