Paenibacillus polymyxa SQR-21: PPSQR21_001220
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Entry
PPSQR21_001220 CDS
T03178
Name
(GenBank) ABC transporter ATPase
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPSQR21_001220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppq02000
]
PPSQR21_001220
Transporters [BR:
ppq02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PPSQR21_001220
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
DUF87
AAA_29
FtsK_SpoIIIE
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AHM63847
LinkDB
All DBs
Position
complement(150933..152693)
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AA seq
586 aa
AA seq
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MVDLLKFAVFLKPYKKETILGPLFKLIEAILELLLPTMVALMINHGVGKGDTHYVWQMGL
LMLLMTILGFGSSLVCQFYAARASQGFGTTLRNTMFKHISSFSYADLDKFGTPSLINRIT
NDVNQLQTAVAMLIRLVIRAPFICIGAIIMSMILDFRLALVLLAATPVLALILYVVITKA
SPLYQLYQKKLDKIALVLSENLTGVRVIRAFAKRGAERVKFNTASDDLTQTAIRVGRISA
LLSPATLLVVNGAIIAILWIGGIHIQYGSLTQGEIIAFINYITQILLALIVVTNLIILFT
KAATSAARIQEVLDTEASISDTANSASFDQVRTGKMSPVPAISFDHVSFGYNKTGQLALS
DVVVDIYPGETVGIIGGTGSGKSTFVNLIPRFYDAVEGCVRVDGIDVRHYKLEQLRQKIG
IVPQKALLFTGSIADNIRWGHEHATDEEVARAAAIAQADEFISNLPEKFDAPITRGGLNL
SGGQKQRLTIARAIVGNPEILILDDSSSALDFATDAALRKSLRENSTRMTVLLVSQRVSS
VQHADKIIVFDEGRIVGIGTHDQLMSSSEVYQEINRSQLSTQEVDQ
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggttgatttgctgaaatttgctgtttttttgaaaccctataaaaaggaaacgattctt
gggcctctgtttaaactaattgaggctattctggaattgttgttgcctactatggtggct
ttaatgattaatcatggcgttggtaagggagacacccattatgtttggcaaatgggtctt
ttaatgttgctcatgactatactgggctttggcagttctctagtgtgccagttttacgca
gcccgtgcttcccaaggattcggaaccacactgcgcaatacgatgtttaagcatatttca
tcgttttcttatgcagatctcgataaatttggtacgccctctctcatcaaccgaattacg
aatgatgtcaatcagctgcaaacagctgtagcgatgttgattcgtctggttattcgtgct
ccttttatttgtatcggggcgatcatcatgtccatgatactggacttccgccttgctttg
gtgctgttggcggctacacccgttctggctttgattctgtatgtagtcattacgaaggct
tctccgctgtaccagctataccagaaaaagctcgataaaatcgctctggtgctaagcgaa
aatctcacaggtgtaagggttatccgtgcatttgccaaaagaggagctgaacgagtaaag
ttcaataccgcctcagatgacctgacccagaccgctattcgtgtcggccgtatttctgct
ctacttagcccagccaccttactggtggtcaacggagctattattgccattctgtggatc
ggcggtattcatatccaatatggatctcttacacaaggagagattattgcgtttattaat
tacattacgcagattttactggccctgattgtggtgacgaatctcattattctgttcacc
aaggctgccacttcagcagcgagaattcaggaggtcctagacacggaagcttcgatttcc
gatactgccaattctgcatcattcgatcaggtaagaacgggtaaaatgagcccagtacca
gccatctcttttgatcatgtctcctttggctacaataagacaggacaactggcacttagc
gatgtagtcgtagacatctatcccggtgaaacggttggaatcataggaggaacaggctcg
ggaaaatccaccttcgtgaatctgattccccgcttctatgatgcagtagaaggttgtgta
cgtgtcgatggcatcgacgtacggcattacaagctggagcaattgcggcagaaaatcggg
attgttccacaaaaggcactgctgttcacagggtctatagcggataatatccgttgggga
catgaacatgccaccgatgaggaagtcgcccgggccgccgctatcgcgcaagcggatgaa
tttatttctaacttaccggaaaaattcgacgccccgatcacgcgaggtggacttaatctg
tcaggcggccaaaagcagcgacttaccattgccagagctattgtaggcaatccggaaata
ctgattttggatgattcctcaagcgcacttgattttgcaactgatgccgcccttcggaaa
tcgcttcgggaaaatagcacccgcatgactgtcctgctggtctcacaacgagtaagcagt
gtacagcatgccgataaaatcattgtatttgatgaaggccggattgtcgggatcggcaca
catgatcagttgatgagcagctcggaggtatatcaggaaattaatcgctcccagctctca
acgcaggaggtagaccaatga
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